RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 STAP2Q9UGK3 403 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 WDR90Q96KV7 1748 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 AOX1Q06278 1338 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 NPHP1O15259 732 aa22.39■■□□□ 1.18
HMGN1-206ENST00000431390 SERPINB2P05120 415 aa22.39■■□□□ 1.18
HMGN1-206ENST00000431390 APLP1P51693 650 aa22.39■■□□□ 1.18
HMGN1-206ENST00000431390 NLRP3Q96P20 1036 aa22.39■■□□□ 1.18
HMGN1-206ENST00000431390 NRXN2Q9P2S2 1712 aa22.39■■□□□ 1.17
HMGN1-206ENST00000431390 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
HMGN1-206ENST00000431390 LRRC24Q50LG9 513 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 GPR108Q9NPR9 543 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 DDR1Q08345 913 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 TFCP2Q12800 502 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 TTC22Q5TAA0 569 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 PRR5LQ6MZQ0 368 aa22.38■■□□□ 1.17
HMGN1-206ENST00000431390 TNRC6CQ9HCJ0 1690 aaKnown RBP22.37■■□□□ 1.17
HMGN1-206ENST00000431390 IFIT2P09913 472 aaKnown RBP22.37■■□□□ 1.17
HMGN1-206ENST00000431390 KCNA3P22001 575 aa22.37■■□□□ 1.17
HMGN1-206ENST00000431390 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
HMGN1-206ENST00000431390 PUS3Q9BZE2 481 aaKnown RBP22.37■■□□□ 1.17
HMGN1-206ENST00000431390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-206ENST00000431390 SBF1O95248 1867 aa22.37■■□□□ 1.17
HMGN1-206ENST00000431390 ST5P78524 1137 aa22.36■■□□□ 1.17
HMGN1-206ENST00000431390 C3orf67Q6ZVT6 689 aa22.36■■□□□ 1.17
HMGN1-206ENST00000431390 AACSQ86V21 672 aa22.36■■□□□ 1.17
HMGN1-206ENST00000431390 EAF2Q96CJ1 260 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-206ENST00000431390 CDC5LQ99459 802 aaKnown RBP22.36■■□□□ 1.17
HMGN1-206ENST00000431390 RIPOR2Q9Y4F9 1068 aa22.36■■□□□ 1.17
HMGN1-206ENST00000431390 TTC41PQ6P2S7 1318 aa22.36■■□□□ 1.17
HMGN1-206ENST00000431390 TNNI3KQ59H18 835 aa22.35■■□□□ 1.17
HMGN1-206ENST00000431390 BACH2Q9BYV9 841 aa22.35■■□□□ 1.17
HMGN1-206ENST00000431390 FPGT-TNNI3KV9GXZ4 949 aa22.35■■□□□ 1.17
HMGN1-206ENST00000431390 SPEF2Q9C093 1822 aa22.35■■□□□ 1.17
HMGN1-206ENST00000431390 C8orf34Q49A92 452 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 C9orf131Q5VYM1 1079 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 SEC31BQ9NQW1 1179 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 CNNM1Q9NRU3 951 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
HMGN1-206ENST00000431390 GSPT1P15170 499 aaKnown RBP22.33■■□□□ 1.17
HMGN1-206ENST00000431390 IGHMBP2P38935 993 aaKnown RBP22.33■■□□□ 1.17
HMGN1-206ENST00000431390 ZNF609O15014 1411 aa22.33■■□□□ 1.17
HMGN1-206ENST00000431390 DNAJC5GQ8N7S2 189 aa22.33■■□□□ 1.16
HMGN1-206ENST00000431390 MPHOSPH8Q99549 860 aa22.33■■□□□ 1.16
HMGN1-206ENST00000431390 PIM2Q9P1W9 311 aa22.33■■□□□ 1.16
HMGN1-206ENST00000431390 CCDC24Q8N4L8 307 aa22.32■■□□□ 1.16
HMGN1-206ENST00000431390 ECHDC1Q9NTX5 307 aa22.32■■□□□ 1.16
HMGN1-206ENST00000431390 AKAP2Q9Y2D5 859 aa22.32■■□□□ 1.16
HMGN1-206ENST00000431390 MROH5Q6ZUA9 1318 aa22.32■■□□□ 1.16
HMGN1-206ENST00000431390 ERC2O15083 957 aa22.31■■□□□ 1.16
HMGN1-206ENST00000431390 METTL24Q5JXM2 366 aa22.31■■□□□ 1.16
HMGN1-206ENST00000431390 ANKRD18AQ8IVF6 992 aa22.31■■□□□ 1.16
HMGN1-206ENST00000431390 CCDC8Q9H0W5 538 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-206ENST00000431390 TAF1P21675 1872 aa22.31■■□□□ 1.16
HMGN1-206ENST00000431390 PI4K2BQ8TCG2 481 aa22.3■■□□□ 1.16
HMGN1-206ENST00000431390 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 COL4A1P02462 1669 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 DALRD3Q5D0E6 543 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 ANKRD31Q8N7Z5 1873 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 VGLL2Q8N8G2 317 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 TSHZ2Q9NRE2 1034 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 A0A1B0GUL6 1792 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 CHRNA5P30532 468 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 CRY2Q49AN0 593 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 TSHZ3Q63HK5 1081 aa22.29■■□□□ 1.16
HMGN1-206ENST00000431390 DDX46Q7L014 1031 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 RBM46Q8TBY0 533 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 TLR7Q9NYK1 1049 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 DBNLQ9UJU6 430 aaKnown RBP22.29■■□□□ 1.16
HMGN1-206ENST00000431390 A0A1B0GUL7 405 aa22.28■■□□□ 1.16
HMGN1-206ENST00000431390 KLRG2A4D1S0 409 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-206ENST00000431390 BSDC1Q9NW68 430 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-206ENST00000431390 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
HMGN1-206ENST00000431390 PDE8BO95263 885 aa22.27■■□□□ 1.16
HMGN1-206ENST00000431390 HTRA3P83110 453 aa22.27■■□□□ 1.16
HMGN1-206ENST00000431390 BRIP1Q9BX63 1249 aa22.27■■□□□ 1.16
HMGN1-206ENST00000431390 AK9Q5TCS8 1911 aa22.27■■□□□ 1.16
HMGN1-206ENST00000431390 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.15
HMGN1-206ENST00000431390 ARAP2Q8WZ64 1704 aa22.26■■□□□ 1.15
HMGN1-206ENST00000431390 SDSP20132 328 aa22.26■■□□□ 1.15
HMGN1-206ENST00000431390 DBNDD2Q9BQY9 259 aa22.26■■□□□ 1.15
HMGN1-206ENST00000431390 CCDC88AQ3V6T2 1871 aa22.26■■□□□ 1.15
HMGN1-206ENST00000431390 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
HMGN1-206ENST00000431390 CELF1Q92879 486 aaKnown RBP22.25■■□□□ 1.15
HMGN1-206ENST00000431390 NEUROD6Q96NK8 337 aa22.25■■□□□ 1.15
HMGN1-206ENST00000431390 TIMM10P62072 90 aa22.25■■□□□ 1.15
HMGN1-206ENST00000431390 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
HMGN1-206ENST00000431390 RPGRQ92834 1020 aaKnown RBP22.25■■□□□ 1.15
HMGN1-206ENST00000431390 CDC45O75419 566 aa22.24■■□□□ 1.15
HMGN1-206ENST00000431390 ATP5JP18859 108 aa22.24■■□□□ 1.15
HMGN1-206ENST00000431390 GRAPQ13588 217 aa22.24■■□□□ 1.15
HMGN1-206ENST00000431390 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
HMGN1-206ENST00000431390 GRAPLQ8TC17 118 aaPredicted RBP22.24■■□□□ 1.15
HMGN1-206ENST00000431390 HOXA10P31260 410 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-206ENST00000431390 CHRNDQ07001 517 aa22.23■■□□□ 1.15
HMGN1-206ENST00000431390 RBM17Q96I25 401 aaKnown RBP22.23■■□□□ 1.15
HMGN1-206ENST00000431390 FGFR2P21802 821 aa22.22■■□□□ 1.15
HMGN1-206ENST00000431390 LPIN2Q92539 896 aa22.22■■□□□ 1.15
HMGN1-206ENST00000431390 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
HMGN1-206ENST00000431390 TIAM2Q8IVF5 1701 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms