RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
ATG4B-211ENST00000429899 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
ATG4B-211ENST00000429899 FKBP1BP68106 108 aa13.29□□□□□ -0.28
ATG4B-211ENST00000429899 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
ATG4B-211ENST00000429899 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
ATG4B-211ENST00000429899 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
ATG4B-211ENST00000429899 BBOX1O75936 387 aa13.28□□□□□ -0.28
ATG4B-211ENST00000429899 SREBF2Q12772 1141 aa13.28□□□□□ -0.28
ATG4B-211ENST00000429899 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
ATG4B-211ENST00000429899 ARMC5Q96C12 935 aa13.28□□□□□ -0.28
ATG4B-211ENST00000429899 CFHR5Q9BXR6 569 aa13.28□□□□□ -0.28
ATG4B-211ENST00000429899 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-211ENST00000429899 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
ATG4B-211ENST00000429899 MCM10Q7L590 875 aa13.27□□□□□ -0.29
ATG4B-211ENST00000429899 COL25A1Q9BXS0 654 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-211ENST00000429899 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
ATG4B-211ENST00000429899 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
ATG4B-211ENST00000429899 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
ATG4B-211ENST00000429899 U2SURPO15042 1029 aaKnown RBP13.26□□□□□ -0.29
ATG4B-211ENST00000429899 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
ATG4B-211ENST00000429899 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
ATG4B-211ENST00000429899 MYCP01106 439 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-211ENST00000429899 SCARF1Q14162 830 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
ATG4B-211ENST00000429899 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
ATG4B-211ENST00000429899 ZNF609O15014 1411 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 ECE2O60344 883 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 MYL6BP14649 208 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 CAP1Q01518 475 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
ATG4B-211ENST00000429899 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 DPF3Q92784 378 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
ATG4B-211ENST00000429899 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-211ENST00000429899 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
ATG4B-211ENST00000429899 HCLS1P14317 486 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-211ENST00000429899 GRAPQ13588 217 aa13.23□□□□□ -0.29
ATG4B-211ENST00000429899 GRAPLQ8TC17 118 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-211ENST00000429899 ZNF333Q96JL9 665 aa13.23□□□□□ -0.29
ATG4B-211ENST00000429899 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
ATG4B-211ENST00000429899 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-211ENST00000429899 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
ATG4B-211ENST00000429899 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
ATG4B-211ENST00000429899 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
ATG4B-211ENST00000429899 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
ATG4B-211ENST00000429899 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-211ENST00000429899 PRKAR2BP31323 418 aa13.21□□□□□ -0.29
ATG4B-211ENST00000429899 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-211ENST00000429899 TCIRG1Q13488 830 aa13.21□□□□□ -0.29
ATG4B-211ENST00000429899 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
ATG4B-211ENST00000429899 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
ATG4B-211ENST00000429899 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
ATG4B-211ENST00000429899 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
ATG4B-211ENST00000429899 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
ATG4B-211ENST00000429899 PRKG1Q13976 671 aa13.2□□□□□ -0.3
ATG4B-211ENST00000429899 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
ATG4B-211ENST00000429899 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
ATG4B-211ENST00000429899 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
ATG4B-211ENST00000429899 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 GPSM2P81274 684 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 OTOFQ9HC10 1997 aa13.19□□□□□ -0.3
ATG4B-211ENST00000429899 VCANP13611 3396 aa13.18□□□□□ -0.3
ATG4B-211ENST00000429899 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
ATG4B-211ENST00000429899 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
ATG4B-211ENST00000429899 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
ATG4B-211ENST00000429899 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
ATG4B-211ENST00000429899 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
ATG4B-211ENST00000429899 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
ATG4B-211ENST00000429899 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
ATG4B-211ENST00000429899 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
ATG4B-211ENST00000429899 NF2P35240 595 aa13.17□□□□□ -0.3
ATG4B-211ENST00000429899 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-211ENST00000429899 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
ATG4B-211ENST00000429899 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
ATG4B-211ENST00000429899 GMLQ99445 158 aa13.17□□□□□ -0.3
ATG4B-211ENST00000429899 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
ATG4B-211ENST00000429899 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-211ENST00000429899 SP3Q02447 781 aa13.16□□□□□ -0.3
ATG4B-211ENST00000429899 CRHR2Q13324 411 aa13.16□□□□□ -0.3
ATG4B-211ENST00000429899 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-211ENST00000429899 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
ATG4B-211ENST00000429899 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
ATG4B-211ENST00000429899 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
ATG4B-211ENST00000429899 INHBEP58166 350 aa13.15□□□□□ -0.3
ATG4B-211ENST00000429899 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
ATG4B-211ENST00000429899 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
ATG4B-211ENST00000429899 Q7L0L9 218 aa13.15□□□□□ -0.3
ATG4B-211ENST00000429899 ARMC9Q7Z3E5 817 aa13.15□□□□□ -0.3
ATG4B-211ENST00000429899 DEFB123Q8N688 67 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms