RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MTX1Q13505 466 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 PKP1Q13835 747 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.74
GABPB1-205ENST00000429662 PPP1R42Q7Z4L9 355 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 TMEM87AQ8NBN3 555 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 GPATCH3Q96I76 525 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 CCDC39Q9UFE4 941 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 NOL7Q9UMY1 257 aaKnown RBP10.46□□□□□ -0.74
GABPB1-205ENST00000429662 RAD50Q92878 1312 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 ITGB4P16144 1822 aa10.46□□□□□ -0.74
GABPB1-205ENST00000429662 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 HIP1O00291 1037 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-205ENST00000429662 OFD1O75665 1012 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 HSPA1AP0DMV8 641 aaKnown RBP10.45□□□□□ -0.74
GABPB1-205ENST00000429662 HSPA1BP0DMV9 641 aaKnown RBP10.45□□□□□ -0.74
GABPB1-205ENST00000429662 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
GABPB1-205ENST00000429662 AKAP4Q5JQC9 854 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 ZSCAN31Q96LW9 406 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-205ENST00000429662 RBSNQ9H1K0 784 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
GABPB1-205ENST00000429662 MEGF6O75095 1541 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 PRIM1P49642 420 aaKnown RBP10.44□□□□□ -0.74
GABPB1-205ENST00000429662 BEND3Q5T5X7 828 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 PI4K2BQ8TCG2 481 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 TM6SF1Q9BZW5 370 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 LIMCH1Q9UPQ0 1083 aa10.44□□□□□ -0.74
GABPB1-205ENST00000429662 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
GABPB1-205ENST00000429662 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
GABPB1-205ENST00000429662 TEFQ10587 303 aa10.43□□□□□ -0.74
GABPB1-205ENST00000429662 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
GABPB1-205ENST00000429662 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
GABPB1-205ENST00000429662 TMEM63CQ9P1W3 806 aa10.43□□□□□ -0.74
GABPB1-205ENST00000429662 DBF4Q9UBU7 674 aaPredicted RBP10.43□□□□□ -0.74
GABPB1-205ENST00000429662 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
GABPB1-205ENST00000429662 POTEB3A0JP26 581 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 EMP3P54852 163 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 FSTL1Q12841 308 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 MMRN1Q13201 1228 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 POTEBQ6S5H4 581 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 SMIM5Q71RC9 77 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 KCNB2Q92953 911 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 LSG1Q9H089 658 aaKnown RBP10.42□□□□□ -0.74
GABPB1-205ENST00000429662 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
GABPB1-205ENST00000429662 SYCE3A1L190 88 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
GABPB1-205ENST00000429662 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 NUTM1Q86Y26 1132 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 UBE2Q2Q8WVN8 375 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 TTC14Q96N46 770 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 PHAXQ9H814 394 aaKnown RBP10.41□□□□□ -0.74
GABPB1-205ENST00000429662 IL1RAPL2Q9NP60 686 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 DIAPH3Q9NSV4 1193 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 ECHDC1Q9NTX5 307 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 HYPKQ9NX55 129 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 CCNL1Q9UK58 526 aaPredicted RBP10.41□□□□□ -0.74
GABPB1-205ENST00000429662 ZKSCAN5Q9Y2L8 839 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 SNX14Q9Y5W7 946 aa10.41□□□□□ -0.74
GABPB1-205ENST00000429662 DDX58O95786 925 aaKnown RBP10.4□□□□□ -0.74
GABPB1-205ENST00000429662 ZSCAN22P10073 491 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-205ENST00000429662 UBE2HP62256 183 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 HSP90AA2PQ14568 343 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-205ENST00000429662 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 CCDC183Q5T5S1 534 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 TSHZ3Q63HK5 1081 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 KSR2Q6VAB6 950 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-205ENST00000429662 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
GABPB1-205ENST00000429662 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
GABPB1-205ENST00000429662 PI4KAP2A4QPH2 592 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 ZKSCAN1P17029 563 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 EIF2S2P20042 333 aaKnown RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 PSMA5P28066 241 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 USP48Q86UV5 1035 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 PI4KAP1Q8N8J0 262 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 MAP7D2Q96T17 732 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 CHPF2Q9P2E5 772 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 RPAP1Q9BWH6 1393 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 HEG1Q9ULI3 1381 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 UTYO14607 1347 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 RNMTO43148 476 aaKnown RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 STX6O43752 255 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 IFIT2P09913 472 aaKnown RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 NBPF7P0C2Y1 421 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 ANKRD1Q15327 319 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 NBPF6Q5VWK0 638 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 ZNF530Q6P9A1 599 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-205ENST00000429662 NBPF4Q96M43 638 aa10.39□□□□□ -0.75
GABPB1-205ENST00000429662 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms