RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 MMP10P09238 476 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 RFX5P48382 616 aaPredicted RBP18.98■□□□□ 0.63
TVP23C-203ENST00000428082 SLC10A5Q5PT55 438 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 KLHDC4Q8TBB5 520 aa18.98■□□□□ 0.63
TVP23C-203ENST00000428082 HSP90AB4PQ58FF6 505 aa18.97■□□□□ 0.63
TVP23C-203ENST00000428082 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
TVP23C-203ENST00000428082 ESYT1Q9BSJ8 1104 aa18.97■□□□□ 0.63
TVP23C-203ENST00000428082 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
TVP23C-203ENST00000428082 GREM2Q9H772 168 aa18.96■□□□□ 0.63
TVP23C-203ENST00000428082 NRXN2Q9P2S2 1712 aa18.96■□□□□ 0.63
TVP23C-203ENST00000428082 TNRC6CQ9HCJ0 1690 aaKnown RBP18.96■□□□□ 0.63
TVP23C-203ENST00000428082 SURF6O75683 361 aaKnown RBP18.96■□□□□ 0.63
TVP23C-203ENST00000428082 HSP90B1P14625 803 aaKnown RBP18.96■□□□□ 0.63
TVP23C-203ENST00000428082 BAG4O95429 457 aaKnown RBP18.95■□□□□ 0.62
TVP23C-203ENST00000428082 PTPN12Q05209 780 aaKnown RBP18.95■□□□□ 0.62
TVP23C-203ENST00000428082 GRPEL1Q9HAV7 217 aa18.95■□□□□ 0.62
TVP23C-203ENST00000428082 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 TRIM6-TRIM34B2RNG4 842 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 ITGA6P23229 1130 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 CHMLP26374 656 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 CCDC57Q2TAC2 916 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 SLC16A10Q8TF71 515 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 ZNF594Q96JF6 807 aaPredicted RBP18.94■□□□□ 0.62
TVP23C-203ENST00000428082 SIL1Q9H173 461 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 COPRSQ9NQ92 184 aa18.94■□□□□ 0.62
TVP23C-203ENST00000428082 CYP2E1P05181 493 aaPredicted RBP18.93■□□□□ 0.62
TVP23C-203ENST00000428082 ST5P78524 1137 aa18.93■□□□□ 0.62
TVP23C-203ENST00000428082 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
TVP23C-203ENST00000428082 KLHL40Q2TBA0 621 aa18.93■□□□□ 0.62
TVP23C-203ENST00000428082 KIF1BPQ96EK5 621 aa18.93■□□□□ 0.62
TVP23C-203ENST00000428082 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
TVP23C-203ENST00000428082 SF3B3Q15393 1217 aaKnown RBP18.92■□□□□ 0.62
TVP23C-203ENST00000428082 CCDC152Q4G0S7 254 aa18.92■□□□□ 0.62
TVP23C-203ENST00000428082 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
TVP23C-203ENST00000428082 TAF1P21675 1872 aa18.92■□□□□ 0.62
TVP23C-203ENST00000428082 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
TVP23C-203ENST00000428082 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
TVP23C-203ENST00000428082 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
TVP23C-203ENST00000428082 RIC1Q4ADV7 1423 aa18.91■□□□□ 0.62
TVP23C-203ENST00000428082 ANKRD18BA2A2Z9 1011 aa18.91■□□□□ 0.62
TVP23C-203ENST00000428082 COL4A1P02462 1669 aa18.91■□□□□ 0.62
TVP23C-203ENST00000428082 ZBTB7AO95365 584 aa18.9■□□□□ 0.62
TVP23C-203ENST00000428082 RTL9Q8NET4 1388 aa18.9■□□□□ 0.62
TVP23C-203ENST00000428082 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.62
TVP23C-203ENST00000428082 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
TVP23C-203ENST00000428082 NEK4P51957 841 aa18.89■□□□□ 0.61
TVP23C-203ENST00000428082 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
TVP23C-203ENST00000428082 RHPN1Q8TCX5 695 aa18.89■□□□□ 0.61
TVP23C-203ENST00000428082 PUS3Q9BZE2 481 aaKnown RBP18.89■□□□□ 0.61
TVP23C-203ENST00000428082 DDX49Q9Y6V7 483 aaKnown RBP18.89■□□□□ 0.61
TVP23C-203ENST00000428082 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
TVP23C-203ENST00000428082 LRRC24Q50LG9 513 aa18.88■□□□□ 0.61
TVP23C-203ENST00000428082 INTS4Q96HW7 963 aaKnown RBP18.88■□□□□ 0.61
TVP23C-203ENST00000428082 ANO2Q9NQ90 1003 aa18.88■□□□□ 0.61
TVP23C-203ENST00000428082 SASH1O94885 1247 aa18.88■□□□□ 0.61
TVP23C-203ENST00000428082 ATG9AQ7Z3C6 839 aa18.88■□□□□ 0.61
TVP23C-203ENST00000428082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.88■□□□□ 0.61
TVP23C-203ENST00000428082 EYA2O00167 538 aa18.87■□□□□ 0.61
TVP23C-203ENST00000428082 CNTROBQ8N137 903 aa18.87■□□□□ 0.61
TVP23C-203ENST00000428082 BRIP1Q9BX63 1249 aa18.87■□□□□ 0.61
TVP23C-203ENST00000428082 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
TVP23C-203ENST00000428082 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
TVP23C-203ENST00000428082 ERC1Q8IUD2 1116 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 MTFR1LQ9H019 292 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 IL1RAPL2Q9NP60 686 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 LRP5O75197 1615 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 CUL4AQ13619 759 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 CRY2Q49AN0 593 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 LDHAL6AQ6ZMR3 332 aa18.86■□□□□ 0.61
TVP23C-203ENST00000428082 KLRG2A4D1S0 409 aaPredicted RBP18.85■□□□□ 0.61
TVP23C-203ENST00000428082 CIAO1O76071 339 aa18.85■□□□□ 0.61
TVP23C-203ENST00000428082 CELF1Q92879 486 aaKnown RBP18.85■□□□□ 0.61
TVP23C-203ENST00000428082 TMX3Q96JJ7 454 aa18.85■□□□□ 0.61
TVP23C-203ENST00000428082 GPATCH3Q96I76 525 aa18.84■□□□□ 0.61
TVP23C-203ENST00000428082 CDC5LQ99459 802 aaKnown RBP18.84■□□□□ 0.61
TVP23C-203ENST00000428082 IL15P40933 162 aaPredicted RBP18.84■□□□□ 0.61
TVP23C-203ENST00000428082 TFCP2Q12800 502 aa18.84■□□□□ 0.61
TVP23C-203ENST00000428082 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
TVP23C-203ENST00000428082 ANP32BQ92688 251 aaKnown RBP18.84■□□□□ 0.61
TVP23C-203ENST00000428082 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
TVP23C-203ENST00000428082 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
TVP23C-203ENST00000428082 RIPOR2Q9Y4F9 1068 aa18.84■□□□□ 0.61
TVP23C-203ENST00000428082 COL11A2P13942 1736 aaPredicted RBP18.83■□□□□ 0.61
TVP23C-203ENST00000428082 HSPA4P34932 840 aa18.83■□□□□ 0.6
TVP23C-203ENST00000428082 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.6
TVP23C-203ENST00000428082 PI4K2BQ8TCG2 481 aa18.83■□□□□ 0.6
TVP23C-203ENST00000428082 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.6
TVP23C-203ENST00000428082 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
TVP23C-203ENST00000428082 PANK2Q9BZ23 570 aa18.83■□□□□ 0.6
TVP23C-203ENST00000428082 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
TVP23C-203ENST00000428082 PDE6BP35913 854 aa18.82■□□□□ 0.6
TVP23C-203ENST00000428082 ZNF445P59923 1031 aa18.82■□□□□ 0.6
TVP23C-203ENST00000428082 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
TVP23C-203ENST00000428082 ZGPATQ8N5A5 531 aaKnown RBP18.82■□□□□ 0.6
TVP23C-203ENST00000428082 LMBRD1Q9NUN5 540 aa18.82■□□□□ 0.6
TVP23C-203ENST00000428082 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms