RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 GGA1Q9UJY5 639 aa32.57■■■□□ 2.8
SMDT1-202ENST00000422252 ECE2O60344 883 aa32.56■■■□□ 2.8
SMDT1-202ENST00000422252 LINS1Q8NG48 757 aa32.56■■■□□ 2.8
SMDT1-202ENST00000422252 ZC3H12CQ9C0D7 883 aaKnown RBP32.56■■■□□ 2.8
SMDT1-202ENST00000422252 CNTNAP1P78357 1384 aa32.56■■■□□ 2.8
SMDT1-202ENST00000422252 DOK7Q18PE1 504 aa32.55■■■□□ 2.8
SMDT1-202ENST00000422252 GREM2Q9H772 168 aa32.55■■■□□ 2.8
SMDT1-202ENST00000422252 MYH3P11055 1940 aa32.55■■■□□ 2.8
SMDT1-202ENST00000422252 RTL9Q8NET4 1388 aa32.55■■■□□ 2.8
SMDT1-202ENST00000422252 PSMD14O00487 310 aa32.54■■■□□ 2.8
SMDT1-202ENST00000422252 CNOT7Q9UIV1 285 aaKnown RBP32.54■■■□□ 2.8
SMDT1-202ENST00000422252 XDHP47989 1333 aa32.53■■■□□ 2.8
SMDT1-202ENST00000422252 ZNF521Q96K83 1311 aa32.53■■■□□ 2.8
SMDT1-202ENST00000422252 PLA2G12BQ9BX93 195 aa32.53■■■□□ 2.8
SMDT1-202ENST00000422252 PCNTO95613 3336 aa32.53■■■□□ 2.8
SMDT1-202ENST00000422252 ZBTB12Q9Y330 459 aaPredicted RBP32.52■■■□□ 2.8
SMDT1-202ENST00000422252 CASP7P55210 303 aa32.51■■■□□ 2.79
SMDT1-202ENST00000422252 DPF2Q92785 391 aa32.51■■■□□ 2.79
SMDT1-202ENST00000422252 BSDC1Q9NW68 430 aaPredicted RBP32.51■■■□□ 2.79
SMDT1-202ENST00000422252 H7C1D1 291 aa32.5■■■□□ 2.79
SMDT1-202ENST00000422252 MICALL2Q8IY33 904 aa32.5■■■□□ 2.79
SMDT1-202ENST00000422252 KCNQ5Q9NR82 932 aa32.5■■■□□ 2.79
SMDT1-202ENST00000422252 SHTN1A0MZ66 631 aa32.49■■■□□ 2.79
SMDT1-202ENST00000422252 G3V3G9 751 aa32.49■■■□□ 2.79
SMDT1-202ENST00000422252 ATP2B4P23634 1241 aa32.49■■■□□ 2.79
SMDT1-202ENST00000422252 DCAF8Q5TAQ9 597 aa32.49■■■□□ 2.79
SMDT1-202ENST00000422252 PGAP2Q9UHJ9 254 aa32.49■■■□□ 2.79
SMDT1-202ENST00000422252 F6X3S4 739 aa32.48■■■□□ 2.79
SMDT1-202ENST00000422252 HSPA1AP0DMV8 641 aaKnown RBP32.48■■■□□ 2.79
SMDT1-202ENST00000422252 HSPA1BP0DMV9 641 aaKnown RBP32.48■■■□□ 2.79
SMDT1-202ENST00000422252 RPS12P25398 132 aaKnown RBP32.48■■■□□ 2.79
SMDT1-202ENST00000422252 HIRAP54198 1017 aaPredicted RBP32.48■■■□□ 2.79
SMDT1-202ENST00000422252 FMR1Q06787 632 aaKnown RBP eCLIP32.48■■■□□ 2.79
SMDT1-202ENST00000422252 IFFO2Q5TF58 517 aa32.48■■■□□ 2.79
SMDT1-202ENST00000422252 TRPM4Q8TD43 1214 aa32.48■■■□□ 2.79
SMDT1-202ENST00000422252 BEND3Q5T5X7 828 aa32.47■■■□□ 2.79
SMDT1-202ENST00000422252 ZC3H15Q8WU90 426 aaKnown RBP32.47■■■□□ 2.79
SMDT1-202ENST00000422252 MINPP1Q9UNW1 487 aa32.47■■■□□ 2.79
SMDT1-202ENST00000422252 RASSF10A6NK89 507 aa32.46■■■□□ 2.79
SMDT1-202ENST00000422252 TRAF5O00463 557 aa32.46■■■□□ 2.79
SMDT1-202ENST00000422252 CSF1RP07333 972 aa32.45■■■□□ 2.79
SMDT1-202ENST00000422252 ITGA6P23229 1130 aa32.45■■■□□ 2.79
SMDT1-202ENST00000422252 IGHMBP2P38935 993 aaKnown RBP32.45■■■□□ 2.79
SMDT1-202ENST00000422252 VEGFBP49765 207 aa32.45■■■□□ 2.79
SMDT1-202ENST00000422252 ABT1Q9ULW3 272 aaKnown RBP32.45■■■□□ 2.79
SMDT1-202ENST00000422252 VIL1P09327 827 aaKnown RBP32.44■■■□□ 2.78
SMDT1-202ENST00000422252 DEFB115Q30KQ5 88 aa32.44■■■□□ 2.78
SMDT1-202ENST00000422252 FAM161AQ3B820 660 aa32.44■■■□□ 2.78
SMDT1-202ENST00000422252 SPEF2Q9C093 1822 aa32.44■■■□□ 2.78
SMDT1-202ENST00000422252 SCN9AQ15858 1988 aa32.43■■■□□ 2.78
SMDT1-202ENST00000422252 SAMD7Q7Z3H4 446 aa32.42■■■□□ 2.78
SMDT1-202ENST00000422252 GLIS2Q9BZE0 524 aaPredicted RBP32.42■■■□□ 2.78
SMDT1-202ENST00000422252 CCT4P50991 539 aaKnown RBP32.41■■■□□ 2.78
SMDT1-202ENST00000422252 CST9Q5W186 159 aa32.41■■■□□ 2.78
SMDT1-202ENST00000422252 TRPM7Q96QT4 1865 aa32.41■■■□□ 2.78
SMDT1-202ENST00000422252 WTIPA6NIX2 430 aaPredicted RBP32.4■■■□□ 2.78
SMDT1-202ENST00000422252 MPHOSPH8Q99549 860 aa32.4■■■□□ 2.78
SMDT1-202ENST00000422252 MED23Q9ULK4 1368 aa32.4■■■□□ 2.78
SMDT1-202ENST00000422252 TBC1D10BQ4KMP7 808 aaPredicted RBP32.39■■■□□ 2.78
SMDT1-202ENST00000422252 CDC37L1Q7L3B6 337 aa32.39■■■□□ 2.78
SMDT1-202ENST00000422252 PODNQ7Z5L7 613 aa32.39■■■□□ 2.78
SMDT1-202ENST00000422252 E9PSI1 815 aa32.38■■■□□ 2.77
SMDT1-202ENST00000422252 ANKRD18BA2A2Z9 1011 aa32.37■■■□□ 2.77
SMDT1-202ENST00000422252 EGFRP00533 1210 aa32.37■■■□□ 2.77
SMDT1-202ENST00000422252 FOXO4P98177 505 aa32.37■■■□□ 2.77
SMDT1-202ENST00000422252 COL13A1Q5TAT6 717 aaPredicted RBP32.37■■■□□ 2.77
SMDT1-202ENST00000422252 RSBN1LQ6PCB5 846 aaPredicted RBP32.37■■■□□ 2.77
SMDT1-202ENST00000422252 ANKRD2Q9GZV1 360 aa32.37■■■□□ 2.77
SMDT1-202ENST00000422252 LEMD3Q9Y2U8 911 aa32.37■■■□□ 2.77
SMDT1-202ENST00000422252 ZNF609O15014 1411 aa32.36■■■□□ 2.77
SMDT1-202ENST00000422252 GRM8O00222 908 aa32.36■■■□□ 2.77
SMDT1-202ENST00000422252 CELF2O95319 508 aaKnown RBP32.36■■■□□ 2.77
SMDT1-202ENST00000422252 RBM26Q5T8P6 1007 aaKnown RBP32.36■■■□□ 2.77
SMDT1-202ENST00000422252 SLC4A10Q6U841 1118 aa32.36■■■□□ 2.77
SMDT1-202ENST00000422252 AGBL3Q8NEM8 1001 aa32.36■■■□□ 2.77
SMDT1-202ENST00000422252 WDR33Q9C0J8 1336 aaKnown RBP32.35■■■□□ 2.77
SMDT1-202ENST00000422252 ALDH1L1O75891 902 aa32.35■■■□□ 2.77
SMDT1-202ENST00000422252 TLL2Q9Y6L7 1015 aa32.35■■■□□ 2.77
SMDT1-202ENST00000422252 USP17L3A6NCW0 530 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 USP17L4A6NCW7 530 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 KIF4BQ2VIQ3 1234 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 USP17L1Q7RTZ2 530 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 SRCIN1Q9C0H9 1055 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 C9orf78Q9NZ63 289 aaPredicted RBP32.34■■■□□ 2.77
SMDT1-202ENST00000422252 PSME4Q14997 1843 aa32.34■■■□□ 2.77
SMDT1-202ENST00000422252 IFIT5Q13325 482 aaKnown RBP32.33■■■□□ 2.77
SMDT1-202ENST00000422252 CHMP3Q9Y3E7 222 aa32.33■■■□□ 2.77
SMDT1-202ENST00000422252 ZNF804BA4D1E1 1349 aa32.32■■■□□ 2.76
SMDT1-202ENST00000422252 CHRNDQ07001 517 aa32.32■■■□□ 2.76
SMDT1-202ENST00000422252 SLFN5Q08AF3 891 aa32.32■■■□□ 2.76
SMDT1-202ENST00000422252 USP48Q86UV5 1035 aa32.32■■■□□ 2.76
SMDT1-202ENST00000422252 MRPL50Q8N5N7 158 aaKnown RBP32.32■■■□□ 2.76
SMDT1-202ENST00000422252 ZNF280AP59817 542 aaPredicted RBP32.31■■■□□ 2.76
SMDT1-202ENST00000422252 LMBR1LQ6UX01 489 aa32.31■■■□□ 2.76
SMDT1-202ENST00000422252 PAXIP1Q6ZW49 1069 aaPredicted RBP32.31■■■□□ 2.76
SMDT1-202ENST00000422252 GMLQ99445 158 aa32.31■■■□□ 2.76
SMDT1-202ENST00000422252 COA1Q9GZY4 146 aa32.31■■■□□ 2.76
SMDT1-202ENST00000422252 ZNF408Q9H9D4 720 aa32.31■■■□□ 2.76
SMDT1-202ENST00000422252 CCER2I3L3R5 266 aa32.3■■■□□ 2.76
SMDT1-202ENST00000422252 ECE1P42892 770 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms