RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 FOXO4P98177 505 aa16.77■□□□□ 0.28
TMEM248-203ENST00000418375 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
TMEM248-203ENST00000418375 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.28
TMEM248-203ENST00000418375 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
TMEM248-203ENST00000418375 SUCLG2Q96I99 432 aa16.77■□□□□ 0.28
TMEM248-203ENST00000418375 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.28
TMEM248-203ENST00000418375 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
TMEM248-203ENST00000418375 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 UBTFL1P0CB47 393 aaPredicted RBP16.76■□□□□ 0.27
TMEM248-203ENST00000418375 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 LMBR1LQ6UX01 489 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 NIM1KQ8IY84 436 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
TMEM248-203ENST00000418375 COL4A5P29400 1685 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 ANKRD18BA2A2Z9 1011 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 MS4A1P11836 297 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 ITGA6P23229 1130 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
TMEM248-203ENST00000418375 IFIT5Q13325 482 aaKnown RBP16.75■□□□□ 0.27
TMEM248-203ENST00000418375 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
TMEM248-203ENST00000418375 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
TMEM248-203ENST00000418375 MPNDQ8N594 471 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 TNNQ9UQP3 1299 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 SCN4AP35499 1836 aa16.75■□□□□ 0.27
TMEM248-203ENST00000418375 GNAI3P08754 354 aa16.74■□□□□ 0.27
TMEM248-203ENST00000418375 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
TMEM248-203ENST00000418375 AOC3Q16853 763 aa16.74■□□□□ 0.27
TMEM248-203ENST00000418375 CCDC57Q2TAC2 916 aa16.74■□□□□ 0.27
TMEM248-203ENST00000418375 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
TMEM248-203ENST00000418375 BICC1Q9H694 974 aaKnown RBP16.74■□□□□ 0.27
TMEM248-203ENST00000418375 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
TMEM248-203ENST00000418375 TMEM57Q8N5G2 664 aa16.73■□□□□ 0.27
TMEM248-203ENST00000418375 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.73■□□□□ 0.27
TMEM248-203ENST00000418375 KAZALD1Q96I82 304 aa16.73■□□□□ 0.27
TMEM248-203ENST00000418375 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
TMEM248-203ENST00000418375 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
TMEM248-203ENST00000418375 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
TMEM248-203ENST00000418375 TAF7LQ5H9L4 462 aa16.72■□□□□ 0.27
TMEM248-203ENST00000418375 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
TMEM248-203ENST00000418375 MEIS3Q99687 375 aa16.72■□□□□ 0.27
TMEM248-203ENST00000418375 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
TMEM248-203ENST00000418375 MYH3P11055 1940 aa16.71■□□□□ 0.27
TMEM248-203ENST00000418375 SCNN1DP51172 638 aa16.71■□□□□ 0.27
TMEM248-203ENST00000418375 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
TMEM248-203ENST00000418375 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
TMEM248-203ENST00000418375 ZNRF3Q9ULT6 936 aa16.71■□□□□ 0.27
TMEM248-203ENST00000418375 EPS15P42566 896 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 GPSM2P81274 684 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 ANKIB1Q9P2G1 1089 aa16.7■□□□□ 0.26
TMEM248-203ENST00000418375 TMEM88BA6NKF7 163 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 RLBP1P12271 317 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 CXCL9Q07325 125 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
TMEM248-203ENST00000418375 XDHP47989 1333 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 COL4A1P02462 1669 aa16.69■□□□□ 0.26
TMEM248-203ENST00000418375 TAF1P21675 1872 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 C6orf229H3BNL8 230 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 GNAI2P04899 355 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
TMEM248-203ENST00000418375 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
TMEM248-203ENST00000418375 USP50Q70EL3 339 aaPredicted RBP16.68■□□□□ 0.26
TMEM248-203ENST00000418375 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 EYA3Q99504 573 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 ANKRD2Q9GZV1 360 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
TMEM248-203ENST00000418375 CNTNAP1P78357 1384 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 ADAMTSL1Q8N6G6 1762 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 PLIN1O60240 522 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 CIAPIN1Q6FI81 312 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 GPRC5DQ9NZD1 345 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 PCNTO95613 3336 aa16.67■□□□□ 0.26
TMEM248-203ENST00000418375 UFL1O94874 794 aa16.66■□□□□ 0.26
TMEM248-203ENST00000418375 TNIP1Q15025 636 aa16.66■□□□□ 0.26
TMEM248-203ENST00000418375 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
TMEM248-203ENST00000418375 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
TMEM248-203ENST00000418375 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
TMEM248-203ENST00000418375 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
TMEM248-203ENST00000418375 RAD17O75943 681 aa16.65■□□□□ 0.26
TMEM248-203ENST00000418375 GMPSP49915 693 aaPredicted RBP16.65■□□□□ 0.26
TMEM248-203ENST00000418375 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
TMEM248-203ENST00000418375 COL13A1Q5TAT6 717 aaPredicted RBP16.65■□□□□ 0.26
TMEM248-203ENST00000418375 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
TMEM248-203ENST00000418375 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
TMEM248-203ENST00000418375 ZBTB7BO15156 539 aaPredicted RBP16.64■□□□□ 0.25
TMEM248-203ENST00000418375 CHRNDQ07001 517 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms