RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 PDE8BO95263 885 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 GPTP24298 496 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 CREB3L3Q68CJ9 461 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 LPIN2Q92539 896 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 TTC14Q96N46 770 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 CDC5LQ99459 802 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
TRAPPC12-205ENST00000416918 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 DEKP35659 375 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 TIMM10P62072 90 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 ITPK1Q13572 414 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 PUM3Q15397 648 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 SLC10A5Q5PT55 438 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 MEX3CQ5U5Q3 659 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 TMED8Q6PL24 325 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.29
TRAPPC12-205ENST00000416918 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 SLC27A2O14975 620 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 PTH1RQ03431 593 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 GREM2Q9H772 168 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 NIP7Q9Y221 180 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
TRAPPC12-205ENST00000416918 UBN2Q6ZU65 1347 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 A0A0G2JS52 829 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 GOLIM4O00461 696 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 ZBTB22O15209 634 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 SLC5A1P13866 664 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 ADRA2BP18089 450 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 CASTP20810 708 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 PUS3Q9BZE2 481 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 IL25Q9H293 177 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
TRAPPC12-205ENST00000416918 TRAK2O60296 914 aa13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 NTSR2O95665 410 aa13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 PDCP20941 246 aa13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 UPF3BQ9BZI7 483 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 RPAP1Q9BWH6 1393 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-205ENST00000416918 KCNQ2O43526 872 aa13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 APPBP2Q92624 585 aa13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 NUP98P52948 1817 aa13.17□□□□□ -0.3
TRAPPC12-205ENST00000416918 THSD7AQ9UPZ6 1657 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 ZPR1O75312 459 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 BRD1O95696 1058 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 FGFR2P21802 821 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 AK2P54819 239 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
TRAPPC12-205ENST00000416918 ATRNO75882 1429 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 AEBP2Q6ZN18 517 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
TRAPPC12-205ENST00000416918 GTF2E1P29083 439 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC12-205ENST00000416918 AFF2P51816 1311 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms