RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ABCC12	Q96J65	1359 aa		11.84	□□□□□ -0.51
NIF3L1-206	ENST00000416651	HABP4	Q5JVS0	413 aa	Known RBP	11.84	□□□□□ -0.51
NIF3L1-206	ENST00000416651	TRPM4	Q8TD43	1214 aa		11.84	□□□□□ -0.51
NIF3L1-206	ENST00000416651	JDP2	Q8WYK2	163 aa		11.84	□□□□□ -0.51
NIF3L1-206	ENST00000416651	MAP3K9	P80192	1104 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	KIF23	Q02241	960 aa	Predicted RBP	11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	HLF	Q16534	295 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	USP48	Q86UV5	1035 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	LARGE2	Q8N3Y3	721 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	ANKK1	Q8NFD2	765 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	IL17RE	Q8NFR9	667 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PSMD1	Q99460	953 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	RNF186	Q9NXI6	227 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	GPRC5D	Q9NZD1	345 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	RABGEF1	Q9UJ41	708 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	HPS5	Q9UPZ3	1129 aa		11.83	□□□□□ -0.52
NIF3L1-206	ENST00000416651	SLC24A1	O60721	1099 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	GMPS	P49915	693 aa	Predicted RBP	11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	HUNK	P57058	714 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	CXCL9	Q07325	125 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	ZNF790	Q6PG37	636 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NUTM1	Q86Y26	1132 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	TTC5	Q8N0Z6	440 aa		11.82	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NBPF26	B4DH59	902 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PPP1R3G	B7ZBB8	358 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	AOC3	Q16853	763 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PROX2	Q3B8N5	592 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NBPF10	Q6P3W6	841 aa	Known RBP	11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NBPF15	Q8N660	670 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	HHIPL1	Q96JK4	782 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	ADARB2	Q9NS39	739 aa	Known RBP	11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PGAP2	Q9UHJ9	254 aa		11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
NIF3L1-206	ENST00000416651	EGFR	P00533	1210 aa		11.8	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NOG	Q13253	232 aa		11.8	□□□□□ -0.52
NIF3L1-206	ENST00000416651	CDCA8	Q53HL2	280 aa		11.8	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PANK3	Q9H999	370 aa		11.8	□□□□□ -0.52
NIF3L1-206	ENST00000416651	NPC1L1	Q9UHC9	1359 aa		11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	SIPA1L3	O60292	1781 aa	Predicted RBP	11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	BCAM	P50895	628 aa		11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	CTU1	Q7Z7A3	348 aa	Known RBP	11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	CSRNP1	Q96S65	589 aa		11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	POLR2A	P24928	1970 aa	Known RBP	11.79	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PPIP5K2	O43314	1243 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	RAD17	O75943	681 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	COL9A1	P20849	921 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	ALDH1B1	P30837	517 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	FXR1	P51114	621 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	RGMB	Q6NW40	437 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	TPTE2	Q6XPS3	522 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651		Q6ZNB5	142 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	MORC1	Q86VD1	984 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	BBX	Q8WY36	941 aa	Predicted RBP	11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	EMILIN3	Q9NT22	766 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	PCDHGA10	Q9Y5H3	936 aa		11.78	□□□□□ -0.52
NIF3L1-206	ENST00000416651	ADM5	C9JUS6	153 aa		11.77	□□□□□ -0.53
NIF3L1-206	ENST00000416651	CRY2	Q49AN0	593 aa		11.77	□□□□□ -0.53
NIF3L1-206	ENST00000416651	NIM1K	Q8IY84	436 aa		11.77	□□□□□ -0.53
NIF3L1-206	ENST00000416651	YDJC	A8MPS7	323 aa		11.76	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SAMD7	Q7Z3H4	446 aa		11.76	□□□□□ -0.53
NIF3L1-206	ENST00000416651	FMNL2	Q96PY5	1086 aa		11.76	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.76	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SOWAHB	A6NEL2	793 aa		11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	CLEC4G	Q6UXB4	293 aa		11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	CDC37L1	Q7L3B6	337 aa		11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SAGE1	Q9NXZ1	904 aa		11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	AKAP11	Q9UKA4	1901 aa		11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ASTN2	O75129	1339 aa	Predicted RBP	11.75	□□□□□ -0.53
NIF3L1-206	ENST00000416651	PPEF1	O14829	653 aa	Predicted RBP	11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TBC1D8	O95759	1140 aa		11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	HOXA10	P31260	410 aa	Predicted RBP	11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZNF157	P51786	506 aa	Predicted RBP	11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TEF	Q10587	303 aa		11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	LAPTM4B	Q86VI4	370 aa		11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	NGEF	Q8N5V2	710 aa		11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	R3HDML	Q9H3Y0	253 aa		11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	GBA2	Q9HCG7	927 aa	Predicted RBP	11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	CNOT7	Q9UIV1	285 aa	Known RBP	11.74	□□□□□ -0.53
NIF3L1-206	ENST00000416651	MKI67	P46013	3256 aa	Known RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SLC10A3	P09131	477 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	GPT	P24298	496 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	GTF2E1	P29083	439 aa	Predicted RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	CAMK2B	Q13554	666 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	UBN2	Q6ZU65	1347 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	MOB2	Q70IA6	237 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	NPM2	Q86SE8	214 aa	Known RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	KCNQ5	Q9NR82	932 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZNRF3	Q9ULT6	936 aa		11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SCAF8	Q9UPN6	1271 aa	Known RBP	11.73	□□□□□ -0.53
NIF3L1-206	ENST00000416651	RBM26	Q5T8P6	1007 aa	Known RBP	11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SUSD4	Q5VX71	490 aa		11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	NYAP1	Q6ZVC0	841 aa		11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	FBXW7	Q969H0	707 aa		11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZFR	Q96KR1	1074 aa	Known RBP	11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	BCL2L13	Q9BXK5	485 aa		11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	KIAA1468	Q9P260	1216 aa		11.72	□□□□□ -0.53
NIF3L1-206	ENST00000416651	BTBD11	A6QL63	1104 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	KCNC4	Q03721	635 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms