RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 NPAS3Q8IXF0 933 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 GALNT12Q8IXK2 581 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 GSX2Q9BZM3 304 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 MARK1Q9P0L2 795 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 ATXN7L1Q9ULK2 861 aaPredicted RBP10.47□□□□□ -0.73
LINC00343-202ENST00000415294 PHF24Q9UPV7 400 aa10.47□□□□□ -0.73
LINC00343-202ENST00000415294 THBS1P07996 1170 aa10.46□□□□□ -0.73
LINC00343-202ENST00000415294 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC00343-202ENST00000415294 CHRDQ9H2X0 955 aa10.46□□□□□ -0.73
LINC00343-202ENST00000415294 MAP3K6O95382 1288 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 EDN3P14138 238 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 CES1P23141 567 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 ITGA6P23229 1130 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 SOX18P35713 384 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 SFSWAPQ12872 951 aaKnown RBP10.45□□□□□ -0.74
LINC00343-202ENST00000415294 FAM182BQ5T319 152 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 TMEM87AQ8NBN3 555 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 IRF7Q92985 503 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 C12orf49Q9H741 205 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 STK17AQ9UEE5 414 aa10.45□□□□□ -0.74
LINC00343-202ENST00000415294 DCDC2BA2VCK2 349 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 SOBPA7XYQ1 873 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
LINC00343-202ENST00000415294 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 DBN1Q16643 649 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 C1orf127Q8N9H9 656 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 OR13H1Q8NG92 308 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 PNMA5Q96PV4 448 aa10.44□□□□□ -0.74
LINC00343-202ENST00000415294 PHF20L1A8MW92 1017 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 H3BM21 787 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
LINC00343-202ENST00000415294 RNF19AQ9NV58 838 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 CNTN3Q9P232 1028 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 FAM8A1Q9UBU6 413 aa10.43□□□□□ -0.74
LINC00343-202ENST00000415294 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 BNIP3LO60238 219 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 SASH3O75995 380 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 RARAP10276 462 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 EPS8L3Q8TE67 593 aaKnown RBP10.42□□□□□ -0.74
LINC00343-202ENST00000415294 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.42□□□□□ -0.74
LINC00343-202ENST00000415294 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 WIZO95785 1651 aa10.42□□□□□ -0.74
LINC00343-202ENST00000415294 EREGO14944 169 aa10.41□□□□□ -0.74
LINC00343-202ENST00000415294 KIAA0319Q5VV43 1072 aa10.41□□□□□ -0.74
LINC00343-202ENST00000415294 SUV39H2Q9H5I1 410 aa10.41□□□□□ -0.74
LINC00343-202ENST00000415294 NPHS2Q9NP85 383 aa10.41□□□□□ -0.74
LINC00343-202ENST00000415294 TLR7Q9NYK1 1049 aaKnown RBP10.41□□□□□ -0.74
LINC00343-202ENST00000415294 PSAPP07602 524 aa10.4□□□□□ -0.74
LINC00343-202ENST00000415294 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
LINC00343-202ENST00000415294 ZNF76P36508 570 aa10.4□□□□□ -0.74
LINC00343-202ENST00000415294 GMPRP36959 345 aa10.4□□□□□ -0.74
LINC00343-202ENST00000415294 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.74
LINC00343-202ENST00000415294 RNF34Q969K3 372 aa10.4□□□□□ -0.74
LINC00343-202ENST00000415294 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.74
LINC00343-202ENST00000415294 MMP20O60882 483 aa10.39□□□□□ -0.75
LINC00343-202ENST00000415294 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
LINC00343-202ENST00000415294 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
LINC00343-202ENST00000415294 FANCCQ00597 558 aa10.39□□□□□ -0.75
LINC00343-202ENST00000415294 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
LINC00343-202ENST00000415294 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
LINC00343-202ENST00000415294 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
LINC00343-202ENST00000415294 NFKB1P19838 968 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 FGFR3P22607 806 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 IRS1P35568 1242 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 ST13P50502 369 aaKnown RBP10.38□□□□□ -0.75
LINC00343-202ENST00000415294 PLAURQ03405 335 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 HYAL2Q12891 473 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 PCSK7Q16549 785 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 GTPBP3Q969Y2 492 aaKnown RBP10.38□□□□□ -0.75
LINC00343-202ENST00000415294 SALL4Q9UJQ4 1053 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 ABCC10Q5T3U5 1492 aa10.38□□□□□ -0.75
LINC00343-202ENST00000415294 KIF4AO95239 1232 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
LINC00343-202ENST00000415294 CTSHP09668 335 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 ERCC5P28715 1186 aaPredicted RBP10.37□□□□□ -0.75
LINC00343-202ENST00000415294 NRLP54845 237 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 PI16Q6UXB8 463 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 KRT25Q7Z3Z0 450 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 BCO2Q9BYV7 579 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 ZFATQ9P243 1243 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
LINC00343-202ENST00000415294 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
LINC00343-202ENST00000415294 XRCC5P13010 732 aaKnown RBP10.36□□□□□ -0.75
LINC00343-202ENST00000415294 CD33P20138 364 aa10.36□□□□□ -0.75
LINC00343-202ENST00000415294 GSTT1P30711 240 aa10.36□□□□□ -0.75
LINC00343-202ENST00000415294 PRPF40BQ6NWY9 871 aaKnown RBP10.36□□□□□ -0.75
LINC00343-202ENST00000415294 METTL16Q86W50 562 aaKnown RBP10.36□□□□□ -0.75
LINC00343-202ENST00000415294 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
LINC00343-202ENST00000415294 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
LINC00343-202ENST00000415294 GRM2Q14416 872 aa10.35□□□□□ -0.75
LINC00343-202ENST00000415294 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms