RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 PITPNM2Q9BZ72 1349 aa20.99■□□□□ 0.95
CPNE1-208ENST00000414711 KDM3BQ7LBC6 1761 aa20.98■□□□□ 0.95
CPNE1-208ENST00000414711 VIL1P09327 827 aaKnown RBP20.98■□□□□ 0.95
CPNE1-208ENST00000414711 ZNF280AP59817 542 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-208ENST00000414711 TTLL12Q14166 644 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-208ENST00000414711 SCN9AQ15858 1988 aa20.97■□□□□ 0.95
CPNE1-208ENST00000414711 ZNF609O15014 1411 aa20.97■□□□□ 0.95
CPNE1-208ENST00000414711 ARMC5Q96C12 935 aa20.97■□□□□ 0.95
CPNE1-208ENST00000414711 POLLQ9UGP5 575 aa20.97■□□□□ 0.95
CPNE1-208ENST00000414711 ALDH1A1P00352 501 aa20.96■□□□□ 0.95
CPNE1-208ENST00000414711 OTUD5Q96G74 571 aa20.96■□□□□ 0.95
CPNE1-208ENST00000414711 EYA3Q99504 573 aa20.96■□□□□ 0.95
CPNE1-208ENST00000414711 SCAF8Q9UPN6 1271 aaKnown RBP20.96■□□□□ 0.95
CPNE1-208ENST00000414711 H0YGN5 161 aa20.95■□□□□ 0.94
CPNE1-208ENST00000414711 HTATSF1O43719 755 aaKnown RBP20.95■□□□□ 0.94
CPNE1-208ENST00000414711 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.94
CPNE1-208ENST00000414711 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
CPNE1-208ENST00000414711 PTPN22Q9Y2R2 807 aa20.95■□□□□ 0.94
CPNE1-208ENST00000414711 ERBB4Q15303 1308 aa20.95■□□□□ 0.94
CPNE1-208ENST00000414711 GPSM2P81274 684 aa20.94■□□□□ 0.94
CPNE1-208ENST00000414711 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
CPNE1-208ENST00000414711 PRAMEF18Q5VWM3 479 aa20.94■□□□□ 0.94
CPNE1-208ENST00000414711 MYOZ2Q9NPC6 264 aa20.93■□□□□ 0.94
CPNE1-208ENST00000414711 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
CPNE1-208ENST00000414711 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
CPNE1-208ENST00000414711 RSBN1LQ6PCB5 846 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-208ENST00000414711 CHRDL2Q6WN34 429 aa20.92■□□□□ 0.94
CPNE1-208ENST00000414711 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
CPNE1-208ENST00000414711 AGBL3Q8NEM8 1001 aa20.92■□□□□ 0.94
CPNE1-208ENST00000414711 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
CPNE1-208ENST00000414711 TMEM106CQ9BVX2 250 aa20.92■□□□□ 0.94
CPNE1-208ENST00000414711 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
CPNE1-208ENST00000414711 NF2P35240 595 aa20.91■□□□□ 0.94
CPNE1-208ENST00000414711 TBC1D16Q8TBP0 767 aa20.91■□□□□ 0.94
CPNE1-208ENST00000414711 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
CPNE1-208ENST00000414711 CELF1Q92879 486 aaKnown RBP20.91■□□□□ 0.94
CPNE1-208ENST00000414711 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
CPNE1-208ENST00000414711 COL4A1P02462 1669 aa20.9■□□□□ 0.94
CPNE1-208ENST00000414711 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-208ENST00000414711 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
CPNE1-208ENST00000414711 SPRYD7Q5W111 196 aa20.9■□□□□ 0.94
CPNE1-208ENST00000414711 LRP10Q7Z4F1 713 aa20.9■□□□□ 0.94
CPNE1-208ENST00000414711 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
CPNE1-208ENST00000414711 RANBP2P49792 3224 aaKnown RBP20.9■□□□□ 0.94
CPNE1-208ENST00000414711 A0A0C4DFX4 3053 aa20.9■□□□□ 0.94
CPNE1-208ENST00000414711 G3V3G9 751 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 USP17L8P0C7I0 530 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 DCAF8Q5TAQ9 597 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 IFNL1Q8IU54 200 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 CD99L2Q8TCZ2 262 aa20.89■□□□□ 0.93
CPNE1-208ENST00000414711 ZC3H12CQ9C0D7 883 aaKnown RBP20.89■□□□□ 0.93
CPNE1-208ENST00000414711 ZNF333Q96JL9 665 aa20.88■□□□□ 0.93
CPNE1-208ENST00000414711 RBM27Q9P2N5 1060 aaKnown RBP20.88■□□□□ 0.93
CPNE1-208ENST00000414711 MANSC4A6NHS7 340 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-208ENST00000414711 U2AF1L5P0DN76 240 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-208ENST00000414711 U2AF1Q01081 240 aaKnown RBP eCLIP20.87■□□□□ 0.932e-6■□□□□ 8.5
CPNE1-208ENST00000414711 CNGB1Q14028 1251 aaPredicted RBP20.87■□□□□ 0.93
CPNE1-208ENST00000414711 ARMC9Q7Z3E5 817 aa20.87■□□□□ 0.93
CPNE1-208ENST00000414711 CFAP53Q96M91 514 aa20.87■□□□□ 0.93
CPNE1-208ENST00000414711 GMLQ99445 158 aa20.87■□□□□ 0.93
CPNE1-208ENST00000414711 EFCC1Q9HA90 598 aa20.87■□□□□ 0.93
CPNE1-208ENST00000414711 PSME4Q14997 1843 aa20.87■□□□□ 0.93
CPNE1-208ENST00000414711 NUDCQ9Y266 331 aa20.86■□□□□ 0.93
CPNE1-208ENST00000414711 COL6A3P12111 3177 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 UFL1O94874 794 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 INHBEP58166 350 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 PRKG1Q13976 671 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 PDIA6Q15084 440 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 PROSER3Q2NL68 480 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 NBPF9Q3BBW0 867 aa20.85■□□□□ 0.93
CPNE1-208ENST00000414711 IGF2BP3O00425 579 aaKnown RBP eCLIP20.84■□□□□ 0.93
CPNE1-208ENST00000414711 ANXA1P04083 346 aa20.83■□□□□ 0.93
CPNE1-208ENST00000414711 SF3B3Q15393 1217 aaKnown RBP20.83■□□□□ 0.93
CPNE1-208ENST00000414711 SLC4A8Q2Y0W8 1093 aa20.83■□□□□ 0.93
CPNE1-208ENST00000414711 LDLRAD1Q5T700 205 aa20.83■□□□□ 0.93
CPNE1-208ENST00000414711 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
CPNE1-208ENST00000414711 PODXL2Q9NZ53 605 aa20.83■□□□□ 0.93
CPNE1-208ENST00000414711 MNX1P50219 401 aaPredicted RBP20.82■□□□□ 0.92
CPNE1-208ENST00000414711 CRHR2Q13324 411 aa20.82■□□□□ 0.92
CPNE1-208ENST00000414711 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
CPNE1-208ENST00000414711 ANGEL1Q9UNK9 670 aaKnown RBP20.82■□□□□ 0.92
CPNE1-208ENST00000414711 LAMB1P07942 1786 aa20.82■□□□□ 0.92
CPNE1-208ENST00000414711 CAP1Q01518 475 aa20.81■□□□□ 0.92
CPNE1-208ENST00000414711 GGA1Q9UJY5 639 aa20.81■□□□□ 0.92
CPNE1-208ENST00000414711 ZBTB48P10074 688 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-208ENST00000414711 EIF2S2P20042 333 aaKnown RBP20.8■□□□□ 0.92
CPNE1-208ENST00000414711 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
CPNE1-208ENST00000414711 ANKIB1Q9P2G1 1089 aa20.8■□□□□ 0.92
CPNE1-208ENST00000414711 USP17L3A6NCW0 530 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 USP17L4A6NCW7 530 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 WNT10BO00744 389 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 RPS8P62241 208 aaKnown RBP20.79■□□□□ 0.92
CPNE1-208ENST00000414711 SP3Q02447 781 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 AIMP1Q12904 312 aaKnown RBP20.79■□□□□ 0.92
CPNE1-208ENST00000414711 COPS6Q7L5N1 327 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 USP17L1Q7RTZ2 530 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 XAGE3Q8WTP9 111 aa20.79■□□□□ 0.92
CPNE1-208ENST00000414711 SLC10A4Q96EP9 437 aa20.78■□□□□ 0.92
CPNE1-208ENST00000414711 WNK4Q96J92 1243 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms