RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 C14orf37Q86TY3 774 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 WFDC8Q8IUA0 241 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 TTC9Q92623 222 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 SEMA6BQ9H3T3 888 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 FAM13BQ9NYF5 915 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 TMEM88BA6NKF7 163 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 DEAF1O75398 565 aaPredicted RBP4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 GHRHP01286 108 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 HOXD8P13378 290 aaPredicted RBP4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 SOX18P35713 384 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 ADGRE1Q14246 886 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 RSPO4Q2I0M5 234 aaPredicted RBP4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 ZMYM1Q5SVZ6 1142 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 FBXO11Q86XK2 927 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 OR13H1Q8NG92 308 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 LENG1Q96BZ8 264 aaPredicted RBP4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 USP21Q9UK80 565 aa4.17□□□□□ -1.74
RNU2-54P-201ENST00000410299 PPP1R15AO75807 674 aaPredicted RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 CYP2E1P05181 493 aaPredicted RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 SSFA2P28290 1259 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 MTMR3Q13615 1198 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 NKAPLQ5M9Q1 402 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 TTC39BQ5VTQ0 682 aaPredicted RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 TXNRD3Q86VQ6 643 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 DTWD1Q8N5C7 304 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 IL22RA1Q8N6P7 574 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 ABTB2Q8N961 1025 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 HELQQ8TDG4 1101 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 GTF3C2Q8WUA4 911 aaPredicted RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 NUDT16Q96DE0 195 aaKnown RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 RBSNQ9H1K0 784 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 TRIM33Q9UPN9 1127 aa4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 FNDC3AQ9Y2H6 1198 aaKnown RBP4.16□□□□□ -1.74
RNU2-54P-201ENST00000410299 DYRK3O43781 588 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 ATP11AP98196 1134 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 NRG1Q02297 640 aaPredicted RBP4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 DNM1Q05193 864 aaKnown RBP4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 HYAL2Q12891 473 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 PHLDB3Q6NSJ2 640 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 ELP3Q9H9T3 547 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 ABI2Q9NYB9 513 aaPredicted RBP4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 TMEM63CQ9P1W3 806 aa4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.15□□□□□ -1.75
RNU2-54P-201ENST00000410299 A6NHS1 94 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 MPSTP25325 297 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 IREB2P48200 963 aaKnown RBP4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 IGF2-ASQ6U949 168 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 ADAMTSL4Q6UY14 1074 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 WFDC12Q8WWY7 111 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 EDEM1Q92611 657 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 LACRTQ9GZZ8 138 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 GGNBP2Q9H3C7 697 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 CNTN3Q9P232 1028 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 KANSL3Q9P2N6 904 aa4.14□□□□□ -1.75
RNU2-54P-201ENST00000410299 DLL1O00548 723 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 PDGFAP04085 211 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 NOS3P29474 1203 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 CDC25BP30305 580 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 EIF1AXP47813 144 aaKnown RBP4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 SETDB1Q15047 1291 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 C8orf34Q49A92 452 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 NOM1Q5C9Z4 860 aaKnown RBP4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 CEP135Q66GS9 1140 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 PDE12Q6L8Q7 609 aaKnown RBP4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 ZNF438Q7Z4V0 828 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 CEP120Q8N960 986 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 TP53INP1Q96A56 240 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 SPACA7Q96KW9 195 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 SSBP4Q9BWG4 385 aaPredicted RBP4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 RASSF4Q9H2L5 321 aa4.13□□□□□ -1.75
RNU2-54P-201ENST00000410299 LINC01387J3KSC0 135 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 ALX3O95076 343 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 KIF4AO95239 1232 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 FOXD4L6Q3SYB3 417 aaPredicted RBP4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 PRSS36Q5K4E3 855 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 TXNDC11Q6PKC3 985 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 FOXD4L3Q6VB84 417 aaPredicted RBP4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 NBPF11Q86T75 865 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 NCAPG2Q86XI2 1143 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 C1orf127Q8N9H9 656 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 ANO2Q9NQ90 1003 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 PPME1Q9Y570 386 aa4.12□□□□□ -1.75
RNU2-54P-201ENST00000410299 TRPA1O75762 1119 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 SMNDC1O75940 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 ABL1P00519 1130 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 RPLP1P05386 114 aaKnown RBP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 H2AFB1P0C5Y9 115 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 H2AFB2P0C5Z0 115 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 ACPPP15309 386 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 PCSK2P16519 638 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 MZF1P28698 734 aaPredicted RBP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 CDC27P30260 824 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 ZNF211Q13398 564 aaPredicted RBP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 AAMPQ13685 434 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 GALNT11Q8NCW6 608 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 MEGF10Q96KG7 1140 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 POP1Q99575 1024 aaKnown RBP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 PBX4Q9BYU1 374 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 AKTIPQ9H8T0 292 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms