RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
EPHA4-202ENST00000409854 SETDB2Q96T68 719 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 USP26Q9BXU7 913 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 CEP126Q9P2H0 1117 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 MROH5Q6ZUA9 1318 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 A0A1B0GUL7 405 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 REC8O95072 547 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 KIF2CQ99661 725 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 HAUS7Q99871 368 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 LTBP1Q14766 1721 aa6.72□□□□□ -1.33
EPHA4-202ENST00000409854 COL11A2P13942 1736 aaPredicted RBP6.71□□□□□ -1.33
EPHA4-202ENST00000409854 FAM177BA6PVY3 158 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 PHF14O94880 888 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 GYS1P13807 737 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 LDHAL6AQ6ZMR3 332 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 IL17RAQ96F46 866 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.33
EPHA4-202ENST00000409854 MAP4K4O95819 1239 aaPredicted RBP6.71□□□□□ -1.34
EPHA4-202ENST00000409854 APBA3O96018 575 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 FGFR2P21802 821 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 ZNF827Q17R98 1081 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 C3orf67Q6ZVT6 689 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 PDE8BO95263 885 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 TM4SF1P30408 202 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 NFIXQ14938 502 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
EPHA4-202ENST00000409854 IL25Q9H293 177 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.34
EPHA4-202ENST00000409854 RAD50Q92878 1312 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 HIP1O00291 1037 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 SGSM2O43147 1006 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 TIMM10P62072 90 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 METTL24Q5JXM2 366 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 BICDL1Q6ZP65 573 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 NBPF5PQ86XG9 351 aaPredicted RBP6.7□□□□□ -1.34
EPHA4-202ENST00000409854 BOLA2Q9H3K6 86 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 CNNM1Q9NRU3 951 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 ATP2B3Q16720 1220 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 XAGE2Q96GT9 111 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 CDC5LQ99459 802 aaKnown RBP6.7□□□□□ -1.34
EPHA4-202ENST00000409854 MAST2Q6P0Q8 1798 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 DLEC1Q9Y238 1755 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 MED23Q9ULK4 1368 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 LAMA4Q16363 1823 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 CACNA1SQ13698 1873 aa6.7□□□□□ -1.34
EPHA4-202ENST00000409854 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
EPHA4-202ENST00000409854 ADORA1P30542 326 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 IGHMBP2P38935 993 aaKnown RBP6.69□□□□□ -1.34
EPHA4-202ENST00000409854 PUM3Q15397 648 aaKnown RBP6.69□□□□□ -1.34
EPHA4-202ENST00000409854 KLHL34Q8N239 644 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 NEUROD6Q96NK8 337 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 FLAD1Q8NFF5 587 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 RUFY2Q8WXA3 655 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 LPIN2Q92539 896 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 SNX21Q969T3 373 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 NLRP3Q96P20 1036 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 MPHOSPH8Q99549 860 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
EPHA4-202ENST00000409854 CCDC88AQ3V6T2 1871 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 ARID4AP29374 1257 aaPredicted RBP6.69□□□□□ -1.34
EPHA4-202ENST00000409854 PDE4CQ08493 712 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 CCDC158Q5M9N0 1113 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 PRR5LQ6MZQ0 368 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 KBTBD3Q8NAB2 608 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 CAMKK2Q96RR4 588 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 LSG1Q9H089 658 aaKnown RBP6.69□□□□□ -1.34
EPHA4-202ENST00000409854 DIAPH3Q9NSV4 1193 aa6.69□□□□□ -1.34
EPHA4-202ENST00000409854 POLRMTO00411 1230 aaKnown RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 ANKRD18AQ8IVF6 992 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 CNBD1Q8NA66 436 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 FSD1Q9BTV5 496 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 PAG1Q9NWQ8 432 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 KIF13BQ9NQT8 1826 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 PNPLA7Q6ZV29 1317 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 ZBTB22O15209 634 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 GTF2E1P29083 439 aaPredicted RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 ANAPC15P60006 121 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 CHRNDQ07001 517 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 DDR1Q08345 913 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 NMIQ13287 307 aaPredicted RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 CRY2Q49AN0 593 aa6.68□□□□□ -1.34
EPHA4-202ENST00000409854 COL23A1Q86Y22 540 aaPredicted RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 EDC3Q96F86 508 aaKnown RBP6.68□□□□□ -1.34
EPHA4-202ENST00000409854 KLRG2A4D1S0 409 aaPredicted RBP6.67□□□□□ -1.34
EPHA4-202ENST00000409854 HSPA4P34932 840 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 BECN1Q14457 450 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 TTC39AQ5SRH9 613 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 CWC27Q6UX04 472 aaKnown RBP6.67□□□□□ -1.34
EPHA4-202ENST00000409854 CELF1Q92879 486 aaKnown RBP6.67□□□□□ -1.34
EPHA4-202ENST00000409854 TBC1D2Q9BYX2 928 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 CHD4Q14839 1912 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 A0A0D9SFI3 127 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 SERPINB2P05120 415 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 SLC5A1P13866 664 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 RABEP1Q15276 862 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms