RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SAGE1Q9NXZ1 904 aa22.08■■□□□ 1.13
SCRN1-203ENST00000409570 TBC1D16Q8TBP0 767 aa22.07■■□□□ 1.12
SCRN1-203ENST00000409570 EYA3Q99504 573 aa22.07■■□□□ 1.12
SCRN1-203ENST00000409570 ZNF157P51786 506 aaPredicted RBP22.06■■□□□ 1.12
SCRN1-203ENST00000409570 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
SCRN1-203ENST00000409570 KIF4BQ2VIQ3 1234 aa22.06■■□□□ 1.12
SCRN1-203ENST00000409570 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
SCRN1-203ENST00000409570 HDGFL1Q5TGJ6 251 aa22.06■■□□□ 1.12
SCRN1-203ENST00000409570 VIL1P09327 827 aaKnown RBP22.05■■□□□ 1.12
SCRN1-203ENST00000409570 RPS8P62241 208 aaKnown RBP22.05■■□□□ 1.12
SCRN1-203ENST00000409570 RNF186Q9NXI6 227 aa22.05■■□□□ 1.12
SCRN1-203ENST00000409570 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
SCRN1-203ENST00000409570 ASTN2O75129 1339 aaPredicted RBP22.05■■□□□ 1.12
SCRN1-203ENST00000409570 IRS4O14654 1257 aaPredicted RBP22.04■■□□□ 1.12
SCRN1-203ENST00000409570 TRPA1O75762 1119 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 SLC10A3P09131 477 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 HOXB7P09629 217 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 GGA3Q9NZ52 723 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 DBF4Q9UBU7 674 aaPredicted RBP22.04■■□□□ 1.12
SCRN1-203ENST00000409570 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
SCRN1-203ENST00000409570 TRIM28Q13263 835 aaKnown RBP22.03■■□□□ 1.12
SCRN1-203ENST00000409570 SULF1Q8IWU6 871 aa22.02■■□□□ 1.12
SCRN1-203ENST00000409570 CSRNP1Q96S65 589 aa22.02■■□□□ 1.12
SCRN1-203ENST00000409570 ZC3H12CQ9C0D7 883 aaKnown RBP22.02■■□□□ 1.12
SCRN1-203ENST00000409570 PODXL2Q9NZ53 605 aa22.02■■□□□ 1.12
SCRN1-203ENST00000409570 ZNF609O15014 1411 aa22.01■■□□□ 1.11
SCRN1-203ENST00000409570 RALBP1Q15311 655 aa22.01■■□□□ 1.11
SCRN1-203ENST00000409570 CDCA5Q96FF9 252 aa22.01■■□□□ 1.11
SCRN1-203ENST00000409570 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
SCRN1-203ENST00000409570 HYPKQ9NX55 129 aa22.01■■□□□ 1.11
SCRN1-203ENST00000409570 PAPPA2Q9BXP8 1791 aa22■■□□□ 1.11
SCRN1-203ENST00000409570 UFL1O94874 794 aa21.99■■□□□ 1.11
SCRN1-203ENST00000409570 SOX10P56693 466 aa21.99■■□□□ 1.11
SCRN1-203ENST00000409570 ZNF280AP59817 542 aaPredicted RBP21.99■■□□□ 1.11
SCRN1-203ENST00000409570 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
SCRN1-203ENST00000409570 RSBN1LQ6PCB5 846 aaPredicted RBP21.98■■□□□ 1.11
SCRN1-203ENST00000409570 RASAL3Q86YV0 1011 aa21.98■■□□□ 1.11
SCRN1-203ENST00000409570 ZBTB38Q8NAP3 1195 aaPredicted RBP21.98■■□□□ 1.11
SCRN1-203ENST00000409570 PCDH10Q9P2E7 1040 aa21.98■■□□□ 1.11
SCRN1-203ENST00000409570 GGA1Q9UJY5 639 aa21.98■■□□□ 1.11
SCRN1-203ENST00000409570 ZNF646O15015 1829 aaPredicted RBP21.97■■□□□ 1.11
SCRN1-203ENST00000409570 G3V3G9 751 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 SCARF1Q14162 830 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 DCAF8Q5TAQ9 597 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 ANGEL2Q5VTE6 544 aaKnown RBP21.97■■□□□ 1.11
SCRN1-203ENST00000409570 AGBL3Q8NEM8 1001 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 ANKIB1Q9P2G1 1089 aa21.97■■□□□ 1.11
SCRN1-203ENST00000409570 SPEF2Q9C093 1822 aa21.96■■□□□ 1.11
SCRN1-203ENST00000409570 MYH3P11055 1940 aa21.96■■□□□ 1.11
SCRN1-203ENST00000409570 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
SCRN1-203ENST00000409570 CTU1Q7Z7A3 348 aaKnown RBP21.96■■□□□ 1.11
SCRN1-203ENST00000409570 GMLQ99445 158 aa21.96■■□□□ 1.11
SCRN1-203ENST00000409570 REM2Q8IYK8 340 aaPredicted RBP21.95■■□□□ 1.1
SCRN1-203ENST00000409570 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
SCRN1-203ENST00000409570 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
SCRN1-203ENST00000409570 PCCAP05165 728 aaPredicted RBP21.93■■□□□ 1.1
SCRN1-203ENST00000409570 HSP90B1P14625 803 aaKnown RBP21.93■■□□□ 1.1
SCRN1-203ENST00000409570 FKBP1BP68106 108 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 GOLGA2Q08379 1002 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 MYD88Q99836 296 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 PITPNM2Q9BZ72 1349 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 MYOZ2Q9NPC6 264 aa21.93■■□□□ 1.1
SCRN1-203ENST00000409570 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
SCRN1-203ENST00000409570 PDE8AO60658 829 aa21.92■■□□□ 1.1
SCRN1-203ENST00000409570 USP17L8P0C7I0 530 aa21.92■■□□□ 1.1
SCRN1-203ENST00000409570 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
SCRN1-203ENST00000409570 XDHP47989 1333 aa21.91■■□□□ 1.1
SCRN1-203ENST00000409570 MOB2Q70IA6 237 aa21.91■■□□□ 1.1
SCRN1-203ENST00000409570 CCDC191Q8NCU4 936 aa21.91■■□□□ 1.1
SCRN1-203ENST00000409570 CCDC85AQ96PX6 553 aaPredicted RBP21.91■■□□□ 1.1
SCRN1-203ENST00000409570 SCAF8Q9UPN6 1271 aaKnown RBP21.91■■□□□ 1.1
SCRN1-203ENST00000409570 USP17L3A6NCW0 530 aa21.9■■□□□ 1.1
SCRN1-203ENST00000409570 USP17L4A6NCW7 530 aa21.9■■□□□ 1.1
SCRN1-203ENST00000409570 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
SCRN1-203ENST00000409570 USP17L1Q7RTZ2 530 aa21.9■■□□□ 1.1
SCRN1-203ENST00000409570 ADAMTS8Q9UP79 889 aa21.9■■□□□ 1.1
SCRN1-203ENST00000409570 ATP2B4P23634 1241 aa21.89■■□□□ 1.09
SCRN1-203ENST00000409570 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.09
SCRN1-203ENST00000409570 PODNQ7Z5L7 613 aa21.89■■□□□ 1.09
SCRN1-203ENST00000409570 ANKRD18AQ8IVF6 992 aa21.89■■□□□ 1.09
SCRN1-203ENST00000409570 HPS5Q9UPZ3 1129 aa21.89■■□□□ 1.09
SCRN1-203ENST00000409570 WTIPA6NIX2 430 aaPredicted RBP21.88■■□□□ 1.09
SCRN1-203ENST00000409570 UBE2Q2LH0YL09 131 aa21.88■■□□□ 1.09
SCRN1-203ENST00000409570 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
SCRN1-203ENST00000409570 NBPF9Q3BBW0 867 aa21.87■■□□□ 1.09
SCRN1-203ENST00000409570 PRAMEF18Q5VWM3 479 aa21.87■■□□□ 1.09
SCRN1-203ENST00000409570 ELL2O00472 640 aaPredicted RBP21.86■■□□□ 1.09
SCRN1-203ENST00000409570 TBC1D8O95759 1140 aa21.86■■□□□ 1.09
SCRN1-203ENST00000409570 ZNF296Q8WUU4 475 aaPredicted RBP21.86■■□□□ 1.09
SCRN1-203ENST00000409570 METTL22Q9BUU2 404 aaPredicted RBP21.86■■□□□ 1.09
SCRN1-203ENST00000409570 MED23Q9ULK4 1368 aa21.86■■□□□ 1.09
SCRN1-203ENST00000409570 PKN2Q16513 984 aaKnown RBP21.85■■□□□ 1.09
SCRN1-203ENST00000409570 PRPF38BQ5VTL8 546 aaKnown RBP21.85■■□□□ 1.09
SCRN1-203ENST00000409570 MXD3Q9BW11 206 aa21.85■■□□□ 1.09
SCRN1-203ENST00000409570 TM4SF4P48230 202 aa21.84■■□□□ 1.09
SCRN1-203ENST00000409570 DACT2Q5SW24 774 aa21.84■■□□□ 1.09
SCRN1-203ENST00000409570 IFT57Q9NWB7 429 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms