RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 NAPBQ9H115 298 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
SMPD4-202ENST00000409031 EIF2AK4Q9P2K8 1649 aaKnown RBP20.16■□□□□ 0.82
SMPD4-202ENST00000409031 AKR1B15C9JRZ8 316 aaPredicted RBP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 ATP8B1O43520 1251 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 SSBP05455 408 aaKnown RBP eCLIP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 SEPT11Q9NVA2 429 aaKnown RBP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 HYPKQ9NX55 129 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 PI4KAP2A4QPH2 592 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 IFIT3O14879 490 aaKnown RBP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 BMP15O95972 392 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 MARCKSP29966 332 aaPredicted RBP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 PI4KAP1Q8N8J0 262 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 NEK11Q8NG66 645 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 FANCCQ00597 558 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 CCDC96Q2M329 555 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 GPATCH8Q9UKJ3 1502 aaKnown RBP20.15■□□□□ 0.82
SMPD4-202ENST00000409031 CFAP43Q8NDM7 1665 aa20.15■□□□□ 0.82
SMPD4-202ENST00000409031 SOS1Q07889 1333 aaPredicted RBP20.14■□□□□ 0.82
SMPD4-202ENST00000409031 ARHGAP25P42331 645 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 MRFAP1L1Q96HT8 127 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 SCLT1Q96NL6 688 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 ALG1Q9BT22 464 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 ETF1P62495 437 aaKnown RBP20.14■□□□□ 0.81
SMPD4-202ENST00000409031 GUCA1BQ9UMX6 200 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 EFCAB8A8MWE9 144 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 NAA25Q14CX7 972 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 CCDC82Q8N4S0 544 aa20.14■□□□□ 0.81
SMPD4-202ENST00000409031 NAPGQ99747 312 aaPredicted RBP20.14■□□□□ 0.81
SMPD4-202ENST00000409031 AOX1Q06278 1338 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
SMPD4-202ENST00000409031 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 EVA1CP58658 441 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
SMPD4-202ENST00000409031 CFAP58Q5T655 872 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
SMPD4-202ENST00000409031 TMCO5BA8MYB1 307 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 IFI16Q16666 785 aaKnown RBP20.13■□□□□ 0.81
SMPD4-202ENST00000409031 MCMDC2Q4G0Z9 681 aa20.13■□□□□ 0.81
SMPD4-202ENST00000409031 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 FAM173BQ6P4H8 233 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 EFCC1Q9HA90 598 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 PRM3Q9NNZ6 103 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 RRAGBQ5VZM2 374 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 CPLX4Q7Z7G2 160 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 MICU3Q86XE3 530 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 CCDC50Q8IVM0 306 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 LRRC8AQ8IWT6 810 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 A0A1B0GVL5 298 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 SGSM2O43147 1006 aa20.12■□□□□ 0.81
SMPD4-202ENST00000409031 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMPD4-202ENST00000409031 USP19O94966 1318 aa20.11■□□□□ 0.81
SMPD4-202ENST00000409031 KIF14Q15058 1648 aa20.11■□□□□ 0.81
SMPD4-202ENST00000409031 CPA1P15085 419 aa20.11■□□□□ 0.81
SMPD4-202ENST00000409031 CCDC155Q8N6L0 562 aa20.11■□□□□ 0.81
SMPD4-202ENST00000409031 RNF41Q9H4P4 317 aaPredicted RBP20.11■□□□□ 0.81
SMPD4-202ENST00000409031 SARNPP82979 210 aaKnown RBP20.1■□□□□ 0.81
SMPD4-202ENST00000409031 PDLIM2Q96JY6 352 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 CAPZA3Q96KX2 299 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 NOS1P29475 1434 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 PPP1R12BO60237 982 aaPredicted RBP20.1■□□□□ 0.81
SMPD4-202ENST00000409031 DHX32Q7L7V1 743 aaKnown RBP20.1■□□□□ 0.81
SMPD4-202ENST00000409031 AMPD3Q01432 767 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 MYD88Q99836 296 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 GSTTP1A0A1W2PQM5 241 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 TMEM67Q5HYA8 995 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 SLC26A6Q9BXS9 759 aa20.1■□□□□ 0.81
SMPD4-202ENST00000409031 LLPHQ9BRT6 129 aaKnown RBP20.09■□□□□ 0.81
SMPD4-202ENST00000409031 GSPT1P15170 499 aaKnown RBP20.09■□□□□ 0.81
SMPD4-202ENST00000409031 NOP2P46087 812 aaKnown RBP20.09■□□□□ 0.81
SMPD4-202ENST00000409031 TERF2Q15554 542 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 ZBTB9Q96C00 473 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 ZNF521Q96K83 1311 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 PZPP20742 1482 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 CETN2P41208 172 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 UBA7P41226 1012 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 AFMP43652 599 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 HAND2P61296 217 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 MAP3K2Q9Y2U5 619 aa20.09■□□□□ 0.81
SMPD4-202ENST00000409031 CPSF2Q9P2I0 782 aaKnown RBP20.09■□□□□ 0.81
SMPD4-202ENST00000409031 PSDA5PKW4 1024 aaPredicted RBP20.08■□□□□ 0.81
SMPD4-202ENST00000409031 CCDC42Q96M95 316 aa20.08■□□□□ 0.81
SMPD4-202ENST00000409031 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.81
SMPD4-202ENST00000409031 MYO1BO43795 1136 aa20.08■□□□□ 0.81
SMPD4-202ENST00000409031 LUC7L2Q9Y383 392 aaKnown RBP20.08■□□□□ 0.81
SMPD4-202ENST00000409031 TM6SF1Q9BZW5 370 aa20.08■□□□□ 0.8
SMPD4-202ENST00000409031 CABP4P57796 275 aa20.08■□□□□ 0.8
SMPD4-202ENST00000409031 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.8
SMPD4-202ENST00000409031 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 KIF5BP33176 963 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms