RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
HERC3-203ENST00000407637 CCDC151A5D8V7 595 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 CTAGE5O15320 804 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 DDX11Q96FC9 970 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 MROH1Q8NDA8 1641 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
HERC3-203ENST00000407637 NUTM2DQ5VT03 806 aaPredicted RBP14.84□□□□□ -0.03
HERC3-203ENST00000407637 WDR24Q96S15 920 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
HERC3-203ENST00000407637 MRFAP1Q9Y605 127 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
HERC3-203ENST00000407637 MYH15Q9Y2K3 1946 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 KIF1CO43896 1103 aaKnown RBP14.83□□□□□ -0.03
HERC3-203ENST00000407637 ATP8B2P98198 1209 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 PSME1Q06323 249 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 STK3Q13188 491 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 CNTROBQ8N137 903 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 DNAAF4Q8WXU2 420 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 GOLGA1Q92805 767 aa14.83□□□□□ -0.03
HERC3-203ENST00000407637 VWA3AA6NCI4 1184 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 KINO60870 393 aaKnown RBP14.83□□□□□ -0.04
HERC3-203ENST00000407637 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
HERC3-203ENST00000407637 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 RESTQ13127 1097 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 PLEKHO1Q53GL0 409 aaPredicted RBP14.83□□□□□ -0.04
HERC3-203ENST00000407637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
HERC3-203ENST00000407637 KAT2BQ92831 832 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 TM6SF1Q9BZW5 370 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 FTOQ9C0B1 505 aaKnown RBP eCLIP14.83□□□□□ -0.04
HERC3-203ENST00000407637 ZSWIM4Q9H7M6 989 aa14.83□□□□□ -0.04
HERC3-203ENST00000407637 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.04
HERC3-203ENST00000407637 IL13P35225 146 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 TXLNAP40222 546 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 TDO2P48775 406 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 SATB1Q01826 763 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 GOLGA8FQ08AF8 430 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 GOLGA8DPQ0D2H9 430 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 CNNM3Q8NE01 707 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 UTP14AQ9BVJ6 771 aaKnown RBP14.82□□□□□ -0.04
HERC3-203ENST00000407637 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
HERC3-203ENST00000407637 MED4Q9NPJ6 270 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 PHACTR2O75167 634 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 WWC2Q6AWC2 1192 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 CCDC73Q6ZRK6 1079 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 SUGCTQ9HAC7 445 aa14.82□□□□□ -0.04
HERC3-203ENST00000407637 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
HERC3-203ENST00000407637 MNAT1P51948 309 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 GNG11P61952 73 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 BRD3Q15059 726 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 SKIDA1Q1XH10 827 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 EFCAB2Q5VUJ9 269 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 JAKMIP3Q5VZ66 844 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 ISM2Q6H9L7 571 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 FMNL2Q96PY5 1086 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
HERC3-203ENST00000407637 JAK2O60674 1132 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 DPCR1Q3MIW9 517 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 BEND6Q5SZJ8 279 aaPredicted RBP14.81□□□□□ -0.04
HERC3-203ENST00000407637 MPHOSPH8Q99549 860 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
HERC3-203ENST00000407637 A0A087WUV0 522 aaPredicted RBP14.8□□□□□ -0.04
HERC3-203ENST00000407637 GIGYF1O75420 1035 aaPredicted RBP14.8□□□□□ -0.04
HERC3-203ENST00000407637 HDXQ7Z353 690 aa14.8□□□□□ -0.04
HERC3-203ENST00000407637 DHX58Q96C10 678 aa14.8□□□□□ -0.04
HERC3-203ENST00000407637 SOS1Q07889 1333 aaPredicted RBP14.8□□□□□ -0.04
HERC3-203ENST00000407637 MINK1Q8N4C8 1332 aaPredicted RBP14.8□□□□□ -0.04
HERC3-203ENST00000407637 EIF3JO75822 258 aaKnown RBP14.8□□□□□ -0.04
HERC3-203ENST00000407637 BRF1Q92994 677 aa14.8□□□□□ -0.04
HERC3-203ENST00000407637 PPFIA4O75335 1185 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 LIG3P49916 1009 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 MCM10Q7L590 875 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
HERC3-203ENST00000407637 CCDC102AQ96A19 550 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 STK26Q9P289 416 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 CHL1O00533 1208 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 ZKSCAN1P17029 563 aaPredicted RBP14.79□□□□□ -0.04
HERC3-203ENST00000407637 PPP2R2CQ9Y2T4 447 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 ERLIN2O94905 339 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 PTPN21Q16825 1174 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 KCNV1Q6PIU1 500 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 FAM204AQ9H8W3 233 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 CFAP45Q9UL16 551 aa14.79□□□□□ -0.04
HERC3-203ENST00000407637 CCDC189A1A4V9 331 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 ZSCAN12O43309 604 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 CREB3L3Q68CJ9 461 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 FSIP1Q8NA03 581 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 KCNB2Q92953 911 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 KIFC2Q96AC6 838 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 PNKPQ96T60 521 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 ANKZF1Q9H8Y5 726 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
HERC3-203ENST00000407637 H3BQV1 296 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 FOSBP53539 338 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 FAM160A1Q05DH4 1040 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 NECTIN1Q15223 517 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 IFFO2Q5TF58 517 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 FBXW10Q5XX13 1052 aa14.78□□□□□ -0.04
HERC3-203ENST00000407637 EGFL6Q8IUX8 553 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms