RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 Q6ZUG5 572 aa19.99■□□□□ 0.79
NUP50-203ENST00000407019 KLHL34Q8N239 644 aa19.99■□□□□ 0.79
NUP50-203ENST00000407019 GTF3C6Q969F1 213 aa19.99■□□□□ 0.79
NUP50-203ENST00000407019 IFIT1P09914 478 aaKnown RBP19.98■□□□□ 0.79
NUP50-203ENST00000407019 DSCC1Q9BVC3 393 aa19.98■□□□□ 0.79
NUP50-203ENST00000407019 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
NUP50-203ENST00000407019 UVSSAQ2YD98 709 aa19.98■□□□□ 0.79
NUP50-203ENST00000407019 ZMYM1Q5SVZ6 1142 aa19.98■□□□□ 0.79
NUP50-203ENST00000407019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.98■□□□□ 0.79
NUP50-203ENST00000407019 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
NUP50-203ENST00000407019 SPEF2Q9C093 1822 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 HMGB1P09429 215 aaKnown RBP19.97■□□□□ 0.79
NUP50-203ENST00000407019 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
NUP50-203ENST00000407019 CCDC57Q2TAC2 916 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 KIF6Q6ZMV9 814 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 FERMT3Q86UX7 667 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 VSIG10Q8N0Z9 540 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 PUS3Q9BZE2 481 aaKnown RBP19.97■□□□□ 0.79
NUP50-203ENST00000407019 CEP126Q9P2H0 1117 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 CCDC39Q9UFE4 941 aa19.97■□□□□ 0.79
NUP50-203ENST00000407019 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
NUP50-203ENST00000407019 TRIM28Q13263 835 aaKnown RBP19.96■□□□□ 0.79
NUP50-203ENST00000407019 FBXO3Q9UK99 471 aa19.96■□□□□ 0.79
NUP50-203ENST00000407019 ELP1O95163 1332 aa19.96■□□□□ 0.79
NUP50-203ENST00000407019 NHSL1Q5SYE7 1610 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 PCCAP05165 728 aaPredicted RBP19.95■□□□□ 0.78
NUP50-203ENST00000407019 STOX1Q6ZVD7 989 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 RNF113AO15541 343 aaKnown RBP19.95■□□□□ 0.78
NUP50-203ENST00000407019 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 ASAP1Q9ULH1 1129 aa19.95■□□□□ 0.78
NUP50-203ENST00000407019 PIGBQ92521 554 aa19.94■□□□□ 0.78
NUP50-203ENST00000407019 BRF1Q92994 677 aa19.94■□□□□ 0.78
NUP50-203ENST00000407019 PLA2G12BQ9BX93 195 aa19.94■□□□□ 0.78
NUP50-203ENST00000407019 AKAP2Q9Y2D5 859 aa19.94■□□□□ 0.78
NUP50-203ENST00000407019 MAST3O60307 1309 aa19.94■□□□□ 0.78
NUP50-203ENST00000407019 JAK2O60674 1132 aa19.93■□□□□ 0.78
NUP50-203ENST00000407019 STARD3NLO95772 234 aa19.93■□□□□ 0.78
NUP50-203ENST00000407019 FGD1P98174 961 aa19.93■□□□□ 0.78
NUP50-203ENST00000407019 DHX32Q7L7V1 743 aaKnown RBP19.93■□□□□ 0.78
NUP50-203ENST00000407019 HCLS1P14317 486 aaPredicted RBP19.93■□□□□ 0.78
NUP50-203ENST00000407019 CCDC158Q5M9N0 1113 aa19.93■□□□□ 0.78
NUP50-203ENST00000407019 SCAND2PQ9GZW5 306 aaPredicted RBP19.93■□□□□ 0.78
NUP50-203ENST00000407019 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.93■□□□□ 0.78
NUP50-203ENST00000407019 ZKSCAN5Q9Y2L8 839 aa19.93■□□□□ 0.78
NUP50-203ENST00000407019 HSPD1P10809 573 aaKnown RBP19.92■□□□□ 0.78
NUP50-203ENST00000407019 MCM5P33992 734 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 LRRFIP1Q32MZ4 808 aaKnown RBP19.92■□□□□ 0.78
NUP50-203ENST00000407019 TTC39AQ5SRH9 613 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 FAM173BQ6P4H8 233 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 GIMAP6Q6P9H5 292 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 ZBTB38Q8NAP3 1195 aaPredicted RBP19.92■□□□□ 0.78
NUP50-203ENST00000407019 FUCA2Q9BTY2 467 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 LRRC2Q9BYS8 371 aa19.92■□□□□ 0.78
NUP50-203ENST00000407019 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 GORABQ5T7V8 394 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 FAM89AQ96GI7 184 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 MAP3K15Q6ZN16 1313 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 ZNF500O60304 480 aaPredicted RBP19.91■□□□□ 0.78
NUP50-203ENST00000407019 PFKFB2O60825 505 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 XAGE2Q96GT9 111 aa19.91■□□□□ 0.78
NUP50-203ENST00000407019 LLPHQ9BRT6 129 aaKnown RBP19.91■□□□□ 0.78
NUP50-203ENST00000407019 CSF1RP07333 972 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 SCRN1Q12765 414 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 IFIT5Q13325 482 aaKnown RBP19.9■□□□□ 0.78
NUP50-203ENST00000407019 LAMA4Q16363 1823 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 M0R2C6 588 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 PTMAP06454 111 aaKnown RBP19.9■□□□□ 0.78
NUP50-203ENST00000407019 ADORA1P30542 326 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 EXOSC10Q01780 885 aaKnown RBP19.9■□□□□ 0.78
NUP50-203ENST00000407019 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
NUP50-203ENST00000407019 GIGYF2Q6Y7W6 1299 aaKnown RBP19.9■□□□□ 0.78
NUP50-203ENST00000407019 SMARCC2Q8TAQ2 1214 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 SPATA32Q96LK8 384 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 CCDC85AQ96PX6 553 aaPredicted RBP19.9■□□□□ 0.78
NUP50-203ENST00000407019 BTG4Q9NY30 223 aa19.9■□□□□ 0.78
NUP50-203ENST00000407019 CDHR2Q9BYE9 1310 aa19.89■□□□□ 0.77
NUP50-203ENST00000407019 E7EWF7 191 aa19.89■□□□□ 0.77
NUP50-203ENST00000407019 AGXT2Q9BYV1 514 aa19.89■□□□□ 0.77
NUP50-203ENST00000407019 H3BQV1 296 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 OFD1O75665 1012 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
NUP50-203ENST00000407019 RESTQ13127 1097 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 IFFO2Q5TF58 517 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 DDX11Q96FC9 970 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 USP25Q9UHP3 1055 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 ABCC12Q96J65 1359 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 HSP90AB3PQ58FF7 597 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
NUP50-203ENST00000407019 LEO1Q8WVC0 666 aaPredicted RBP19.88■□□□□ 0.77
NUP50-203ENST00000407019 OSBP2Q969R2 916 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
NUP50-203ENST00000407019 DISP2A7MBM2 1401 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 GOLGA6L4A6NEF3 574 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 APOBRQ0VD83 1088 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 NUP62CLQ9H1M0 184 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 ZSCAN16Q9H4T2 348 aaPredicted RBP19.87■□□□□ 0.77
NUP50-203ENST00000407019 TFIP11Q9UBB9 837 aaKnown RBP19.87■□□□□ 0.77
NUP50-203ENST00000407019 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms