RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 KIF23Q02241 960 aaPredicted RBP8.16□□□□□ -1.1
RPA3-204ENST00000406109 TNIP1Q15025 636 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 PARP10Q53GL7 1025 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 RGMBQ6NW40 437 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 PPP1R42Q7Z4L9 355 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 MPNDQ8N594 471 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 SUPT20HQ8NEM7 779 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 DPF2Q92785 391 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 CSRNP1Q96S65 589 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 PLEKHF1Q96S99 279 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 BCL2L13Q9BXK5 485 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 VCANP13611 3396 aa8.16□□□□□ -1.1
RPA3-204ENST00000406109 LRRC37AA6NMS7 1700 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 UNC80Q8N2C7 3258 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 RTL9Q8NET4 1388 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 H7C1D1 291 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 ANXA1P04083 346 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 TBC1D10BQ4KMP7 808 aaPredicted RBP8.15□□□□□ -1.1
RPA3-204ENST00000406109 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 NLRP10Q86W26 655 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 PNISRQ8TF01 805 aaKnown RBP8.15□□□□□ -1.1
RPA3-204ENST00000406109 PHF12Q96QT6 1004 aa8.15□□□□□ -1.1
RPA3-204ENST00000406109 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 SLC10A3P09131 477 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 ZNF157P51786 506 aaPredicted RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 GRAPQ13588 217 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 PRPF38BQ5VTL8 546 aaKnown RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 GRAPLQ8TC17 118 aaPredicted RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 TMX4Q9H1E5 349 aaPredicted RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 PRKRIP1Q9H875 184 aaPredicted RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 GBA2Q9HCG7 927 aaPredicted RBP8.14□□□□□ -1.11
RPA3-204ENST00000406109 POLLQ9UGP5 575 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 TRIOBPQ9H2D6 2365 aa8.14□□□□□ -1.11
RPA3-204ENST00000406109 CUL9Q8IWT3 2517 aa8.13□□□□□ -1.11
RPA3-204ENST00000406109 ASTN2O75129 1339 aaPredicted RBP8.13□□□□□ -1.11
RPA3-204ENST00000406109 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
RPA3-204ENST00000406109 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
RPA3-204ENST00000406109 NFE2L2Q16236 605 aa8.13□□□□□ -1.11
RPA3-204ENST00000406109 DDX46Q7L014 1031 aaKnown RBP8.13□□□□□ -1.11
RPA3-204ENST00000406109 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
RPA3-204ENST00000406109 DBNDD1Q9H9R9 158 aa8.13□□□□□ -1.11
RPA3-204ENST00000406109 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 ANP32CO43423 234 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 VIL1P09327 827 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 EIF2S2P20042 333 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 TCIRG1Q13488 830 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 COPS6Q7L5N1 327 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 CTU1Q7Z7A3 348 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 C2orf69Q8N8R5 385 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 CELF1Q92879 486 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 TRMT112Q9UI30 125 aaKnown RBP8.12□□□□□ -1.11
RPA3-204ENST00000406109 HPS5Q9UPZ3 1129 aa8.12□□□□□ -1.11
RPA3-204ENST00000406109 SH3TC1Q8TE82 1336 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 RIMBP2O15034 1052 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 ECE2O60344 883 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 NEFMP07197 916 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 RPS12P25398 132 aaKnown RBP8.11□□□□□ -1.11
RPA3-204ENST00000406109 GPSM2P81274 684 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 DOK7Q18PE1 504 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 RBM26Q5T8P6 1007 aaKnown RBP8.11□□□□□ -1.11
RPA3-204ENST00000406109 TMC4Q7Z404 712 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 RASAL3Q86YV0 1011 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
RPA3-204ENST00000406109 CDCA5Q96FF9 252 aa8.11□□□□□ -1.11
RPA3-204ENST00000406109 ZNF280AP59817 542 aaPredicted RBP8.1□□□□□ -1.11
RPA3-204ENST00000406109 AIMP1Q12904 312 aaKnown RBP8.1□□□□□ -1.11
RPA3-204ENST00000406109 SF3B3Q15393 1217 aaKnown RBP8.1□□□□□ -1.11
RPA3-204ENST00000406109 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 MOB2Q70IA6 237 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 TBC1D16Q8TBP0 767 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 GMLQ99445 158 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 PNNQ9H307 717 aaKnown RBP8.1□□□□□ -1.11
RPA3-204ENST00000406109 GGA3Q9NZ52 723 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 TSPYL4Q9UJ04 414 aa8.1□□□□□ -1.11
RPA3-204ENST00000406109 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
RPA3-204ENST00000406109 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 PSME4Q14997 1843 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 SCARF1Q14162 830 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 WDR43Q15061 677 aaKnown RBP eCLIP8.09□□□□□ -1.11
RPA3-204ENST00000406109 KRT24Q2M2I5 525 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 HSP90AB3PQ58FF7 597 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
RPA3-204ENST00000406109 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 FAM89AQ96GI7 184 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 ISCA1Q9BUE6 129 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 R3HDMLQ9H3Y0 253 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 SCAF8Q9UPN6 1271 aaKnown RBP8.09□□□□□ -1.11
RPA3-204ENST00000406109 ZNF609O15014 1411 aa8.09□□□□□ -1.11
RPA3-204ENST00000406109 DNAH12Q6ZR08 3092 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 TBC1D8O95759 1140 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 PKN2Q16513 984 aaKnown RBP8.08□□□□□ -1.12
RPA3-204ENST00000406109 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
RPA3-204ENST00000406109 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms