RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 DBNDD1Q9H9R9 158 aa20.2■□□□□ 0.82
ATG4B-203ENST00000400772 ANKIB1Q9P2G1 1089 aa20.2■□□□□ 0.82
ATG4B-203ENST00000400772 TNIP1Q15025 636 aa20.19■□□□□ 0.82
ATG4B-203ENST00000400772 DOK7Q18PE1 504 aa20.19■□□□□ 0.82
ATG4B-203ENST00000400772 MAP1SQ66K74 1059 aaPredicted RBP20.19■□□□□ 0.82
ATG4B-203ENST00000400772 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
ATG4B-203ENST00000400772 KCNQ5Q9NR82 932 aa20.19■□□□□ 0.82
ATG4B-203ENST00000400772 BSDC1Q9NW68 430 aaPredicted RBP20.19■□□□□ 0.82
ATG4B-203ENST00000400772 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
ATG4B-203ENST00000400772 MYH3P11055 1940 aa20.18■□□□□ 0.82
ATG4B-203ENST00000400772 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-203ENST00000400772 UFL1O94874 794 aa20.18■□□□□ 0.82
ATG4B-203ENST00000400772 USP50Q70EL3 339 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-203ENST00000400772 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
ATG4B-203ENST00000400772 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
ATG4B-203ENST00000400772 MINPP1Q9UNW1 487 aa20.18■□□□□ 0.82
ATG4B-203ENST00000400772 PSMD14O00487 310 aa20.17■□□□□ 0.82
ATG4B-203ENST00000400772 ECE2O60344 883 aa20.17■□□□□ 0.82
ATG4B-203ENST00000400772 ZC3H12CQ9C0D7 883 aaKnown RBP20.17■□□□□ 0.82
ATG4B-203ENST00000400772 ITGA6P23229 1130 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 FOXO4P98177 505 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 JMYQ8N9B5 988 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 CREBZFQ9NS37 354 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 ADARB2Q9NS39 739 aaKnown RBP20.16■□□□□ 0.82
ATG4B-203ENST00000400772 ZBTB12Q9Y330 459 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-203ENST00000400772 XDHP47989 1333 aa20.16■□□□□ 0.82
ATG4B-203ENST00000400772 SHTN1A0MZ66 631 aa20.15■□□□□ 0.82
ATG4B-203ENST00000400772 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
ATG4B-203ENST00000400772 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
ATG4B-203ENST00000400772 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
ATG4B-203ENST00000400772 HIRAP54198 1017 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-203ENST00000400772 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
ATG4B-203ENST00000400772 SLC4A10Q6U841 1118 aa20.14■□□□□ 0.81
ATG4B-203ENST00000400772 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
ATG4B-203ENST00000400772 GRM8O00222 908 aa20.13■□□□□ 0.81
ATG4B-203ENST00000400772 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
ATG4B-203ENST00000400772 IGHMBP2P38935 993 aaKnown RBP20.13■□□□□ 0.81
ATG4B-203ENST00000400772 DPF2Q92785 391 aa20.13■□□□□ 0.81
ATG4B-203ENST00000400772 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
ATG4B-203ENST00000400772 SCN9AQ15858 1988 aa20.12■□□□□ 0.81
ATG4B-203ENST00000400772 TMEM88BA6NKF7 163 aa20.11■□□□□ 0.81
ATG4B-203ENST00000400772 VIL1P09327 827 aaKnown RBP20.11■□□□□ 0.81
ATG4B-203ENST00000400772 CCT4P50991 539 aaKnown RBP20.11■□□□□ 0.81
ATG4B-203ENST00000400772 FMR1Q06787 632 aaKnown RBP eCLIP20.11■□□□□ 0.81
ATG4B-203ENST00000400772 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
ATG4B-203ENST00000400772 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
ATG4B-203ENST00000400772 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
ATG4B-203ENST00000400772 SPEF2Q9C093 1822 aa20.11■□□□□ 0.81
ATG4B-203ENST00000400772 ANKRD18BA2A2Z9 1011 aa20.1■□□□□ 0.81
ATG4B-203ENST00000400772 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
ATG4B-203ENST00000400772 MIER1Q8N108 512 aa20.1■□□□□ 0.81
ATG4B-203ENST00000400772 KAZALD1Q96I82 304 aa20.1■□□□□ 0.81
ATG4B-203ENST00000400772 MPHOSPH8Q99549 860 aa20.1■□□□□ 0.81
ATG4B-203ENST00000400772 C9orf78Q9NZ63 289 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-203ENST00000400772 PTPRCP08575 1304 aa20.09■□□□□ 0.81
ATG4B-203ENST00000400772 H7C1D1 291 aa20.09■□□□□ 0.81
ATG4B-203ENST00000400772 RPS12P25398 132 aaKnown RBP20.09■□□□□ 0.81
ATG4B-203ENST00000400772 ALDH1L2Q3SY69 923 aa20.09■□□□□ 0.81
ATG4B-203ENST00000400772 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
ATG4B-203ENST00000400772 MKRN1Q9UHC7 482 aaKnown RBP20.09■□□□□ 0.81
ATG4B-203ENST00000400772 PCNTO95613 3336 aa20.09■□□□□ 0.81
ATG4B-203ENST00000400772 MED23Q9ULK4 1368 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 UTYO14607 1347 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 G3V3G9 751 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 TRAF5O00463 557 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 EGFRP00533 1210 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
ATG4B-203ENST00000400772 CHRNDQ07001 517 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
ATG4B-203ENST00000400772 DCAF8Q5TAQ9 597 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
ATG4B-203ENST00000400772 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
ATG4B-203ENST00000400772 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
ATG4B-203ENST00000400772 ZC3H15Q8WU90 426 aaKnown RBP20.07■□□□□ 0.8
ATG4B-203ENST00000400772 ANKRD2Q9GZV1 360 aa20.07■□□□□ 0.8
ATG4B-203ENST00000400772 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
ATG4B-203ENST00000400772 ZNF804BA4D1E1 1349 aa20.06■□□□□ 0.8
ATG4B-203ENST00000400772 KLRK1P26718 216 aa20.06■□□□□ 0.8
ATG4B-203ENST00000400772 CST9Q5W186 159 aa20.06■□□□□ 0.8
ATG4B-203ENST00000400772 RSBN1LQ6PCB5 846 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-203ENST00000400772 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-203ENST00000400772 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
ATG4B-203ENST00000400772 SNAP23O00161 211 aa20.05■□□□□ 0.8
ATG4B-203ENST00000400772 CT47B1P0C2W7 299 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-203ENST00000400772 TBC1D10BQ4KMP7 808 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-203ENST00000400772 GMLQ99445 158 aa20.05■□□□□ 0.8
ATG4B-203ENST00000400772 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-203ENST00000400772 USP17L3A6NCW0 530 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 USP17L4A6NCW7 530 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 TAF5LO75529 589 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 USP17L1Q7RTZ2 530 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 AGBL3Q8NEM8 1001 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 HELBQ8NG08 1087 aaPredicted RBP20.04■□□□□ 0.8
ATG4B-203ENST00000400772 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
ATG4B-203ENST00000400772 IRS2Q9Y4H2 1338 aa20.03■□□□□ 0.8
ATG4B-203ENST00000400772 ZNF609O15014 1411 aa20.03■□□□□ 0.8
ATG4B-203ENST00000400772 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms