RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
CDC42-203ENST00000400259 ZNF831Q5JPB2 1677 aa18.8■□□□□ 0.6
CDC42-203ENST00000400259 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
CDC42-203ENST00000400259 ZSCAN22P10073 491 aaPredicted RBP18.79■□□□□ 0.6
CDC42-203ENST00000400259 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 TAF6LQ9Y6J9 622 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 ARAP2Q8WZ64 1704 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 STX6O43752 255 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 SYT1P21579 422 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 CAVIN1Q6NZI2 390 aaKnown RBP18.79■□□□□ 0.6
CDC42-203ENST00000400259 CCDC83Q8IWF9 413 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
CDC42-203ENST00000400259 TPCN1Q9ULQ1 816 aa18.79■□□□□ 0.6
CDC42-203ENST00000400259 SLIT2O94813 1529 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 LAMB2P55268 1798 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
CDC42-203ENST00000400259 DDB1Q16531 1140 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 TMEM87AQ8NBN3 555 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 TTLL11Q8NHH1 800 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
CDC42-203ENST00000400259 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
CDC42-203ENST00000400259 CHGBP05060 677 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 CTSWP56202 376 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 COL5A3P25940 1745 aaPredicted RBP18.77■□□□□ 0.6
CDC42-203ENST00000400259 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
CDC42-203ENST00000400259 COL9A3Q14050 684 aaPredicted RBP18.77■□□□□ 0.6
CDC42-203ENST00000400259 TOB2Q14106 344 aaPredicted RBP18.77■□□□□ 0.6
CDC42-203ENST00000400259 DZIP3Q86Y13 1208 aaKnown RBP18.77■□□□□ 0.6
CDC42-203ENST00000400259 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
CDC42-203ENST00000400259 GPTP24298 496 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 GJB2P29033 226 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 CCDC158Q5M9N0 1113 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 XAGE2Q96GT9 111 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
CDC42-203ENST00000400259 ADAMTS2O95450 1211 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 EIF5P55010 431 aaKnown RBP18.76■□□□□ 0.59
CDC42-203ENST00000400259 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 PKNOX2Q96KN3 472 aa18.76■□□□□ 0.59
CDC42-203ENST00000400259 RRAGDQ9NQL2 400 aaPredicted RBP18.76■□□□□ 0.59
CDC42-203ENST00000400259 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
CDC42-203ENST00000400259 DDX60Q8IY21 1712 aaKnown RBP18.75■□□□□ 0.59
CDC42-203ENST00000400259 CYP21A2P08686 494 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 NCLP19338 710 aaKnown RBP18.75■□□□□ 0.59
CDC42-203ENST00000400259 ITGA6P23229 1130 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 AK7Q96M32 723 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 BCORQ6W2J9 1755 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 IRS4O14654 1257 aaPredicted RBP18.75■□□□□ 0.59
CDC42-203ENST00000400259 F13A1P00488 732 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
CDC42-203ENST00000400259 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
CDC42-203ENST00000400259 ATP6V1DQ9Y5K8 247 aa18.75■□□□□ 0.59
CDC42-203ENST00000400259 ANKRD18BA2A2Z9 1011 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 PDE8AO60658 829 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 ADORA1P30542 326 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 GREM2Q9H772 168 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
CDC42-203ENST00000400259 MARCH10Q8NA82 808 aaPredicted RBP18.74■□□□□ 0.59
CDC42-203ENST00000400259 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 TRMT112Q9UI30 125 aaKnown RBP18.74■□□□□ 0.59
CDC42-203ENST00000400259 MAST3O60307 1309 aa18.74■□□□□ 0.59
CDC42-203ENST00000400259 VGLL2Q8N8G2 317 aa18.73■□□□□ 0.59
CDC42-203ENST00000400259 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
CDC42-203ENST00000400259 ZNF512BQ96KM6 892 aaPredicted RBP18.73■□□□□ 0.59
CDC42-203ENST00000400259 CCDC85AQ96PX6 553 aaPredicted RBP18.73■□□□□ 0.59
CDC42-203ENST00000400259 TMEM63CQ9P1W3 806 aa18.73■□□□□ 0.59
CDC42-203ENST00000400259 MTMR6Q9Y217 621 aa18.73■□□□□ 0.59
CDC42-203ENST00000400259 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
CDC42-203ENST00000400259 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
CDC42-203ENST00000400259 NSFL1CQ9UNZ2 370 aaKnown RBP18.72■□□□□ 0.59
CDC42-203ENST00000400259 TBC1D2BQ9UPU7 963 aa18.72■□□□□ 0.59
CDC42-203ENST00000400259 ATP2B3Q16720 1220 aa18.72■□□□□ 0.59
CDC42-203ENST00000400259 GORABQ5T7V8 394 aa18.72■□□□□ 0.59
CDC42-203ENST00000400259 LDHAL6AQ6ZMR3 332 aa18.72■□□□□ 0.59
CDC42-203ENST00000400259 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
CDC42-203ENST00000400259 USP48Q86UV5 1035 aa18.71■□□□□ 0.59
CDC42-203ENST00000400259 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
CDC42-203ENST00000400259 MYO5AQ9Y4I1 1855 aaKnown RBP18.71■□□□□ 0.59
CDC42-203ENST00000400259 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
CDC42-203ENST00000400259 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
CDC42-203ENST00000400259 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
CDC42-203ENST00000400259 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
CDC42-203ENST00000400259 PDCP20941 246 aa18.7■□□□□ 0.58
CDC42-203ENST00000400259 SIK1P57059 783 aa18.7■□□□□ 0.58
CDC42-203ENST00000400259 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
CDC42-203ENST00000400259 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDC42-203ENST00000400259 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
CDC42-203ENST00000400259 DOCK2Q92608 1830 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 SCARF1Q14162 830 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms