RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 RPS8P62241 208 aaKnown RBP32.1■■■□□ 2.73
U2AF1-203ENST00000398137 PNMA8AQ86V59 439 aaPredicted RBP32.1■■■□□ 2.73
U2AF1-203ENST00000398137 POLLQ9UGP5 575 aa32.1■■■□□ 2.73
U2AF1-203ENST00000398137 CDHR2Q9BYE9 1310 aa32.09■■■□□ 2.73
U2AF1-203ENST00000398137 ALDH1L1O75891 902 aa32.09■■■□□ 2.73
U2AF1-203ENST00000398137 MAP1SQ66K74 1059 aaPredicted RBP32.08■■■□□ 2.73
U2AF1-203ENST00000398137 CREBZFQ9NS37 354 aa32.08■■■□□ 2.73
U2AF1-203ENST00000398137 NSFL1CQ9UNZ2 370 aaKnown RBP32.08■■■□□ 2.73
U2AF1-203ENST00000398137 MYH3P11055 1940 aa32.07■■■□□ 2.72
U2AF1-203ENST00000398137 CLEC11AQ9Y240 323 aa32.07■■■□□ 2.72
U2AF1-203ENST00000398137 PLIN1O60240 522 aa32.06■■■□□ 2.72
U2AF1-203ENST00000398137 CCT4P50991 539 aaKnown RBP32.06■■■□□ 2.72
U2AF1-203ENST00000398137 UBE3BQ7Z3V4 1068 aa32.06■■■□□ 2.72
U2AF1-203ENST00000398137 CCDC85AQ96PX6 553 aaPredicted RBP32.06■■■□□ 2.72
U2AF1-203ENST00000398137 GPRC5DQ9NZD1 345 aa32.06■■■□□ 2.72
U2AF1-203ENST00000398137 LMOD1P29536 600 aaPredicted RBP32.05■■■□□ 2.72
U2AF1-203ENST00000398137 GPR101Q96P66 508 aaPredicted RBP32.05■■■□□ 2.72
U2AF1-203ENST00000398137 RAD17O75943 681 aa32.04■■■□□ 2.72
U2AF1-203ENST00000398137 CCDC152Q4G0S7 254 aa32.04■■■□□ 2.72
U2AF1-203ENST00000398137 FTSJ3Q8IY81 847 aaKnown RBP32.04■■■□□ 2.72
U2AF1-203ENST00000398137 CNTROBQ8N137 903 aa32.04■■■□□ 2.72
U2AF1-203ENST00000398137 H7C1W4 665 aa32.03■■■□□ 2.72
U2AF1-203ENST00000398137 HSP90B1P14625 803 aaKnown RBP32.03■■■□□ 2.72
U2AF1-203ENST00000398137 GMPSP49915 693 aaPredicted RBP32.03■■■□□ 2.72
U2AF1-203ENST00000398137 CIAPIN1Q6FI81 312 aa32.03■■■□□ 2.72
U2AF1-203ENST00000398137 DZIP1LQ8IYY4 767 aaKnown RBP32.03■■■□□ 2.72
U2AF1-203ENST00000398137 TBC1D16Q8TBP0 767 aa32.03■■■□□ 2.72
U2AF1-203ENST00000398137 GRM8O00222 908 aa32.02■■■□□ 2.72
U2AF1-203ENST00000398137 WASHC4Q2M389 1173 aa32.02■■■□□ 2.72
U2AF1-203ENST00000398137 INTS3Q68E01 1043 aaKnown RBP32.02■■■□□ 2.72
U2AF1-203ENST00000398137 PODXL2Q9NZ53 605 aa32.02■■■□□ 2.72
U2AF1-203ENST00000398137 C9orf78Q9NZ63 289 aaPredicted RBP32.02■■■□□ 2.72
U2AF1-203ENST00000398137 RLBP1P12271 317 aa32.01■■■□□ 2.71
U2AF1-203ENST00000398137 CTSWP56202 376 aa32.01■■■□□ 2.71
U2AF1-203ENST00000398137 TTLL11Q8NHH1 800 aa32.01■■■□□ 2.71
U2AF1-203ENST00000398137 SCN9AQ15858 1988 aa32.01■■■□□ 2.71
U2AF1-203ENST00000398137 RIMBP2O15034 1052 aa32■■■□□ 2.71
U2AF1-203ENST00000398137 CASP7P55210 303 aa32■■■□□ 2.71
U2AF1-203ENST00000398137 USP50Q70EL3 339 aaPredicted RBP32■■■□□ 2.71
U2AF1-203ENST00000398137 TMEM57Q8N5G2 664 aa32■■■□□ 2.71
U2AF1-203ENST00000398137 DBNDD1Q9H9R9 158 aa32■■■□□ 2.71
U2AF1-203ENST00000398137 SPEF2Q9C093 1822 aa32■■■□□ 2.71
U2AF1-203ENST00000398137 SHTN1A0MZ66 631 aa31.99■■■□□ 2.71
U2AF1-203ENST00000398137 C6orf229H3BNL8 230 aa31.99■■■□□ 2.71
U2AF1-203ENST00000398137 FMR1Q06787 632 aaKnown RBP eCLIP31.99■■■□□ 2.71
U2AF1-203ENST00000398137 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.99■■■□□ 2.71
U2AF1-203ENST00000398137 PANK1Q8TE04 598 aa31.99■■■□□ 2.71
U2AF1-203ENST00000398137 KCNQ5Q9NR82 932 aa31.99■■■□□ 2.71
U2AF1-203ENST00000398137 ADARB2Q9NS39 739 aaKnown RBP31.98■■■□□ 2.71
U2AF1-203ENST00000398137 MKRN1Q9UHC7 482 aaKnown RBP31.98■■■□□ 2.71
U2AF1-203ENST00000398137 GREM2Q9H772 168 aa31.97■■■□□ 2.71
U2AF1-203ENST00000398137 CNTNAP1P78357 1384 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 RTL9Q8NET4 1388 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 TMEM88BA6NKF7 163 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 NBPF7P0C2Y1 421 aaPredicted RBP31.96■■■□□ 2.71
U2AF1-203ENST00000398137 TNIP1Q15025 636 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 DOK7Q18PE1 504 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 USP44Q9H0E7 712 aa31.96■■■□□ 2.71
U2AF1-203ENST00000398137 PSMD14O00487 310 aa31.95■■■□□ 2.71
U2AF1-203ENST00000398137 HIRAP54198 1017 aaPredicted RBP31.95■■■□□ 2.71
U2AF1-203ENST00000398137 RRP1P56182 461 aaKnown RBP31.95■■■□□ 2.71
U2AF1-203ENST00000398137 ZBTB12Q9Y330 459 aaPredicted RBP31.95■■■□□ 2.71
U2AF1-203ENST00000398137 UTYO14607 1347 aa31.95■■■□□ 2.7
U2AF1-203ENST00000398137 WTIPA6NIX2 430 aaPredicted RBP31.94■■■□□ 2.7
U2AF1-203ENST00000398137 ECE2O60344 883 aa31.94■■■□□ 2.7
U2AF1-203ENST00000398137 MS4A1P11836 297 aa31.94■■■□□ 2.7
U2AF1-203ENST00000398137 ANKRD18AQ8IVF6 992 aa31.94■■■□□ 2.7
U2AF1-203ENST00000398137 ITPRIPQ8IWB1 547 aa31.94■■■□□ 2.7
U2AF1-203ENST00000398137 UFL1O94874 794 aa31.93■■■□□ 2.7
U2AF1-203ENST00000398137 EYA3Q99504 573 aa31.93■■■□□ 2.7
U2AF1-203ENST00000398137 PLA2G12BQ9BX93 195 aa31.93■■■□□ 2.7
U2AF1-203ENST00000398137 C20orf194Q5TEA3 1177 aa31.92■■■□□ 2.7
U2AF1-203ENST00000398137 TRPM4Q8TD43 1214 aa31.92■■■□□ 2.7
U2AF1-203ENST00000398137 SUCLG2Q96I99 432 aa31.92■■■□□ 2.7
U2AF1-203ENST00000398137 MEIS3Q99687 375 aa31.92■■■□□ 2.7
U2AF1-203ENST00000398137 ANKIB1Q9P2G1 1089 aa31.92■■■□□ 2.7
U2AF1-203ENST00000398137 TRPM7Q96QT4 1865 aa31.91■■■□□ 2.7
U2AF1-203ENST00000398137 TRAF5O00463 557 aa31.91■■■□□ 2.7
U2AF1-203ENST00000398137 PGAP2Q9UHJ9 254 aa31.91■■■□□ 2.7
U2AF1-203ENST00000398137 CNOT7Q9UIV1 285 aaKnown RBP31.91■■■□□ 2.7
U2AF1-203ENST00000398137 GGA1Q9UJY5 639 aa31.91■■■□□ 2.7
U2AF1-203ENST00000398137 PSME4Q14997 1843 aa31.9■■■□□ 2.7
U2AF1-203ENST00000398137 UBTFL1P0CB47 393 aaPredicted RBP31.89■■■□□ 2.7
U2AF1-203ENST00000398137 EPHA10Q5JZY3 1008 aa31.89■■■□□ 2.7
U2AF1-203ENST00000398137 CDC5LQ99459 802 aaKnown RBP31.89■■■□□ 2.7
U2AF1-203ENST00000398137 ZC3H12CQ9C0D7 883 aaKnown RBP31.89■■■□□ 2.7
U2AF1-203ENST00000398137 XDHP47989 1333 aa31.89■■■□□ 2.7
U2AF1-203ENST00000398137 CSF1RP07333 972 aa31.88■■■□□ 2.69
U2AF1-203ENST00000398137 HSPA1AP0DMV8 641 aaKnown RBP31.88■■■□□ 2.69
U2AF1-203ENST00000398137 HSPA1BP0DMV9 641 aaKnown RBP31.88■■■□□ 2.69
U2AF1-203ENST00000398137 PDE3AQ14432 1141 aa31.88■■■□□ 2.69
U2AF1-203ENST00000398137 MICALL2Q8IY33 904 aa31.88■■■□□ 2.69
U2AF1-203ENST00000398137 DPF2Q92785 391 aa31.88■■■□□ 2.69
U2AF1-203ENST00000398137 BSDC1Q9NW68 430 aaPredicted RBP31.88■■■□□ 2.69
U2AF1-203ENST00000398137 MINPP1Q9UNW1 487 aa31.88■■■□□ 2.69
U2AF1-203ENST00000398137 EGFRP00533 1210 aa31.87■■■□□ 2.69
U2AF1-203ENST00000398137 CST9Q5W186 159 aa31.87■■■□□ 2.69
U2AF1-203ENST00000398137 COG6Q9Y2V7 657 aa31.87■■■□□ 2.69
U2AF1-203ENST00000398137 VEGFBP49765 207 aa31.86■■■□□ 2.69
U2AF1-203ENST00000398137 FOXO4P98177 505 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms