RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
NDE1-201ENST00000396354 UBE3BQ7Z3V4 1068 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
NDE1-201ENST00000396354 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
NDE1-201ENST00000396354 JAK2O60674 1132 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 ECHDC1Q9NTX5 307 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.05□□□□□ -0.64
NDE1-201ENST00000396354 NPHP1O15259 732 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 ADAMTS2O95450 1211 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 LIG1P18858 919 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 HSP90AB3PQ58FF7 597 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 CCDC183Q5T5S1 534 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
NDE1-201ENST00000396354 FTOQ9C0B1 505 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■□□□□ 8.5
NDE1-201ENST00000396354 GLRX3O76003 335 aaKnown RBP11.05□□□□□ -0.64
NDE1-201ENST00000396354 CCT2P78371 535 aaKnown RBP11.05□□□□□ -0.64
NDE1-201ENST00000396354 ZNF589Q86UQ0 364 aaPredicted RBP11.05□□□□□ -0.64
NDE1-201ENST00000396354 PDLIM2Q96JY6 352 aa11.05□□□□□ -0.64
NDE1-201ENST00000396354 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 ABCB7O75027 752 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 DDX58O95786 925 aaKnown RBP11.04□□□□□ -0.64
NDE1-201ENST00000396354 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 CBX1P83916 185 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 RPAP1Q9BWH6 1393 aaPredicted RBP11.04□□□□□ -0.64
NDE1-201ENST00000396354 COL15A1P39059 1388 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
NDE1-201ENST00000396354 LRMPQ12912 555 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 ZBTB9Q96C00 473 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 GPATCH3Q96I76 525 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 DACT1Q9NYF0 836 aa11.04□□□□□ -0.64
NDE1-201ENST00000396354 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
NDE1-201ENST00000396354 H3BQV1 296 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 IFFO2Q5TF58 517 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 CREB3L3Q68CJ9 461 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 AP5Z1O43299 807 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 PTGS1P23219 599 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 HSPA1LP34931 641 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 ANAPC15P60006 121 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 NOLC1Q14978 699 aaKnown RBP eCLIP11.03□□□□□ -0.64
NDE1-201ENST00000396354 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
NDE1-201ENST00000396354 C16orf45Q96MC5 204 aaPredicted RBP11.03□□□□□ -0.64
NDE1-201ENST00000396354 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 SRCAPQ6ZRS2 3230 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 RUFY2Q8WXA3 655 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
NDE1-201ENST00000396354 TRIM5Q9C035 493 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 NRBP1Q9UHY1 535 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
NDE1-201ENST00000396354 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
NDE1-201ENST00000396354 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 UBE2HP62256 183 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 TNS2Q63HR2 1409 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 TTC6Q86TZ1 520 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 TTC14Q96N46 770 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.64
NDE1-201ENST00000396354 A0A087WZG4 1122 aa11.02□□□□□ -0.65
NDE1-201ENST00000396354 TFCP2Q12800 502 aa11.02□□□□□ -0.65
NDE1-201ENST00000396354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
NDE1-201ENST00000396354 SPATA32Q96LK8 384 aa11.02□□□□□ -0.65
NDE1-201ENST00000396354 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.65
NDE1-201ENST00000396354 SNRKQ9NRH2 765 aa11.02□□□□□ -0.65
NDE1-201ENST00000396354 FOXO4P98177 505 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 TNMDQ9H2S6 317 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
NDE1-201ENST00000396354 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.01□□□□□ -0.65
NDE1-201ENST00000396354 V9GYY5 206 aaPredicted RBP11.01□□□□□ -0.65
NDE1-201ENST00000396354 IL2RBP14784 551 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 RABL6Q3YEC7 729 aaPredicted RBP11.01□□□□□ -0.65
NDE1-201ENST00000396354 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 DNAJC25Q9H1X3 360 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 A0A0G2JLW4 131 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 NEXNQ0ZGT2 675 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
NDE1-201ENST00000396354 ISM2Q6H9L7 571 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
NDE1-201ENST00000396354 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
NDE1-201ENST00000396354 HAND2P61296 217 aa11□□□□□ -0.65
NDE1-201ENST00000396354 ANO6Q4KMQ2 910 aa11□□□□□ -0.65
NDE1-201ENST00000396354 SASS6Q6UVJ0 657 aa11□□□□□ -0.65
NDE1-201ENST00000396354 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
NDE1-201ENST00000396354 BRF1Q92994 677 aa11□□□□□ -0.65
NDE1-201ENST00000396354 ZNF594Q96JF6 807 aaPredicted RBP11□□□□□ -0.65
NDE1-201ENST00000396354 BTG4Q9NY30 223 aa11□□□□□ -0.65
NDE1-201ENST00000396354 ATP6V1DQ9Y5K8 247 aa11□□□□□ -0.65
NDE1-201ENST00000396354 SLC27A2O14975 620 aa11□□□□□ -0.65
NDE1-201ENST00000396354 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
NDE1-201ENST00000396354 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
NDE1-201ENST00000396354 FILIP1Q7Z7B0 1213 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms