RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PSMD14O00487 310 aa20.74■□□□□ 0.91
CXCL12-206ENST00000395795 HSP90B1P14625 803 aaKnown RBP20.74■□□□□ 0.91
CXCL12-206ENST00000395795 IFFO2Q5TF58 517 aa20.74■□□□□ 0.91
CXCL12-206ENST00000395795 DNAAF4Q8WXU2 420 aa20.74■□□□□ 0.91
CXCL12-206ENST00000395795 PLA2G12BQ9BX93 195 aa20.74■□□□□ 0.91
CXCL12-206ENST00000395795 ZBTB12Q9Y330 459 aaPredicted RBP20.74■□□□□ 0.91
CXCL12-206ENST00000395795 C6orf229H3BNL8 230 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 TRAF5O00463 557 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 ECE2O60344 883 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 TNIP1Q15025 636 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 DOK7Q18PE1 504 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 CST9Q5W186 159 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 UBE3BQ7Z3V4 1068 aa20.73■□□□□ 0.91
CXCL12-206ENST00000395795 RASSF10A6NK89 507 aa20.72■□□□□ 0.91
CXCL12-206ENST00000395795 EGFRP00533 1210 aa20.72■□□□□ 0.91
CXCL12-206ENST00000395795 HSPA1AP0DMV8 641 aaKnown RBP20.72■□□□□ 0.91
CXCL12-206ENST00000395795 HSPA1BP0DMV9 641 aaKnown RBP20.72■□□□□ 0.91
CXCL12-206ENST00000395795 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
CXCL12-206ENST00000395795 MYH3P11055 1940 aa20.72■□□□□ 0.91
CXCL12-206ENST00000395795 F6X3S4 739 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 UFL1O94874 794 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 CSF1RP07333 972 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 VEGFBP49765 207 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 FKBP5Q13451 457 aaPredicted RBP20.71■□□□□ 0.91
CXCL12-206ENST00000395795 COL13A1Q5TAT6 717 aaPredicted RBP20.71■□□□□ 0.91
CXCL12-206ENST00000395795 ANKRD18AQ8IVF6 992 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 LINS1Q8NG48 757 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 DPF2Q92785 391 aa20.71■□□□□ 0.91
CXCL12-206ENST00000395795 CNOT7Q9UIV1 285 aaKnown RBP20.71■□□□□ 0.91
CXCL12-206ENST00000395795 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
CXCL12-206ENST00000395795 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
CXCL12-206ENST00000395795 EYA3Q99504 573 aa20.7■□□□□ 0.9
CXCL12-206ENST00000395795 GGA1Q9UJY5 639 aa20.7■□□□□ 0.9
CXCL12-206ENST00000395795 MINPP1Q9UNW1 487 aa20.7■□□□□ 0.9
CXCL12-206ENST00000395795 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
CXCL12-206ENST00000395795 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
CXCL12-206ENST00000395795 BSDC1Q9NW68 430 aaPredicted RBP20.69■□□□□ 0.9
CXCL12-206ENST00000395795 XDHP47989 1333 aa20.69■□□□□ 0.9
CXCL12-206ENST00000395795 ZNF609O15014 1411 aa20.69■□□□□ 0.9
CXCL12-206ENST00000395795 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
CXCL12-206ENST00000395795 MYH16Q9H6N6 1097 aa20.68■□□□□ 0.9
CXCL12-206ENST00000395795 ANKIB1Q9P2G1 1089 aa20.68■□□□□ 0.9
CXCL12-206ENST00000395795 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
CXCL12-206ENST00000395795 FOXO4P98177 505 aa20.67■□□□□ 0.9
CXCL12-206ENST00000395795 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
CXCL12-206ENST00000395795 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
CXCL12-206ENST00000395795 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
CXCL12-206ENST00000395795 CDC5LQ99459 802 aaKnown RBP20.67■□□□□ 0.9
CXCL12-206ENST00000395795 ZC3H12CQ9C0D7 883 aaKnown RBP20.67■□□□□ 0.9
CXCL12-206ENST00000395795 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
CXCL12-206ENST00000395795 TRPM7Q96QT4 1865 aa20.67■□□□□ 0.9
CXCL12-206ENST00000395795 DLK2Q6UY11 383 aa20.66■□□□□ 0.9
CXCL12-206ENST00000395795 GMLQ99445 158 aa20.66■□□□□ 0.9
CXCL12-206ENST00000395795 PSME4Q14997 1843 aa20.66■□□□□ 0.9
CXCL12-206ENST00000395795 ITGA6P23229 1130 aa20.65■□□□□ 0.9
CXCL12-206ENST00000395795 ATP2B4P23634 1241 aa20.65■□□□□ 0.9
CXCL12-206ENST00000395795 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
CXCL12-206ENST00000395795 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
CXCL12-206ENST00000395795 TXNRD3Q86VQ6 643 aa20.65■□□□□ 0.9
CXCL12-206ENST00000395795 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.9
CXCL12-206ENST00000395795 IRS2Q9Y4H2 1338 aa20.64■□□□□ 0.89
CXCL12-206ENST00000395795 DEFB115Q30KQ5 88 aa20.64■□□□□ 0.89
CXCL12-206ENST00000395795 MED23Q9ULK4 1368 aa20.63■□□□□ 0.89
CXCL12-206ENST00000395795 H7C1D1 291 aa20.63■□□□□ 0.89
CXCL12-206ENST00000395795 KLRK1P26718 216 aa20.63■□□□□ 0.89
CXCL12-206ENST00000395795 CCT4P50991 539 aaKnown RBP20.63■□□□□ 0.89
CXCL12-206ENST00000395795 TBC1D10BQ4KMP7 808 aaPredicted RBP20.63■□□□□ 0.89
CXCL12-206ENST00000395795 TLL2Q9Y6L7 1015 aa20.63■□□□□ 0.89
CXCL12-206ENST00000395795 ASTN2O75129 1339 aaPredicted RBP20.62■□□□□ 0.89
CXCL12-206ENST00000395795 ZNF280AP59817 542 aaPredicted RBP20.62■□□□□ 0.89
CXCL12-206ENST00000395795 WBP1LQ9NX94 342 aa20.62■□□□□ 0.89
CXCL12-206ENST00000395795 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
CXCL12-206ENST00000395795 FOXN1O15353 648 aa20.61■□□□□ 0.89
CXCL12-206ENST00000395795 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
CXCL12-206ENST00000395795 KAZALD1Q96I82 304 aa20.61■□□□□ 0.89
CXCL12-206ENST00000395795 ABT1Q9ULW3 272 aaKnown RBP20.61■□□□□ 0.89
CXCL12-206ENST00000395795 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
CXCL12-206ENST00000395795 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
CXCL12-206ENST00000395795 PODNQ7Z5L7 613 aa20.6■□□□□ 0.89
CXCL12-206ENST00000395795 SAPCD2Q86UD0 394 aa20.6■□□□□ 0.89
CXCL12-206ENST00000395795 USP48Q86UV5 1035 aa20.6■□□□□ 0.89
CXCL12-206ENST00000395795 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
CXCL12-206ENST00000395795 SNAP23O00161 211 aa20.59■□□□□ 0.89
CXCL12-206ENST00000395795 GRM8O00222 908 aa20.59■□□□□ 0.89
CXCL12-206ENST00000395795 CELF2O95319 508 aaKnown RBP20.59■□□□□ 0.89
CXCL12-206ENST00000395795 TRMT2AQ8IZ69 625 aaKnown RBP20.59■□□□□ 0.89
CXCL12-206ENST00000395795 AGBL3Q8NEM8 1001 aa20.59■□□□□ 0.89
CXCL12-206ENST00000395795 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
CXCL12-206ENST00000395795 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
CXCL12-206ENST00000395795 CHRNDQ07001 517 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 DACT2Q5SW24 774 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.89
CXCL12-206ENST00000395795 CYP4F22Q6NT55 531 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 CDCA7LQ96GN5 454 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 MXD3Q9BW11 206 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 LEMD3Q9Y2U8 911 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 A0A1B0GUL6 1792 aa20.58■□□□□ 0.89
CXCL12-206ENST00000395795 USP17L3A6NCW0 530 aa20.57■□□□□ 0.88
CXCL12-206ENST00000395795 USP17L4A6NCW7 530 aa20.57■□□□□ 0.88
CXCL12-206ENST00000395795 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms