RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 FAM89AQ96GI7 184 aa25.7■■□□□ 1.7
UPK3B-203ENST00000394849 ZC3H12CQ9C0D7 883 aaKnown RBP25.7■■□□□ 1.7
UPK3B-203ENST00000394849 DBF4Q9UBU7 674 aaPredicted RBP25.7■■□□□ 1.7
UPK3B-203ENST00000394849 ADM5C9JUS6 153 aa25.69■■□□□ 1.7
UPK3B-203ENST00000394849 RPS8P62241 208 aaKnown RBP25.69■■□□□ 1.7
UPK3B-203ENST00000394849 TRIM28Q13263 835 aaKnown RBP25.69■■□□□ 1.7
UPK3B-203ENST00000394849 DLK2Q6UY11 383 aa25.69■■□□□ 1.7
UPK3B-203ENST00000394849 TBC1D16Q8TBP0 767 aa25.69■■□□□ 1.7
UPK3B-203ENST00000394849 CHPF2Q9P2E5 772 aa25.69■■□□□ 1.7
UPK3B-203ENST00000394849 RTL9Q8NET4 1388 aa25.69■■□□□ 1.7
UPK3B-203ENST00000394849 FKBP1BP68106 108 aa25.68■■□□□ 1.7
UPK3B-203ENST00000394849 DOK7Q18PE1 504 aa25.68■■□□□ 1.7
UPK3B-203ENST00000394849 PODXL2Q9NZ53 605 aa25.68■■□□□ 1.7
UPK3B-203ENST00000394849 G3V3G9 751 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 ZNF609O15014 1411 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 DCAF8Q5TAQ9 597 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 HDGFL1Q5TGJ6 251 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 CSRNP1Q96S65 589 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 HYPKQ9NX55 129 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 GGA3Q9NZ52 723 aa25.67■■□□□ 1.7
UPK3B-203ENST00000394849 CTU1Q7Z7A3 348 aaKnown RBP25.66■■□□□ 1.7
UPK3B-203ENST00000394849 AGBL3Q8NEM8 1001 aa25.66■■□□□ 1.7
UPK3B-203ENST00000394849 IRS4O14654 1257 aaPredicted RBP25.65■■□□□ 1.7
UPK3B-203ENST00000394849 ZNF280AP59817 542 aaPredicted RBP25.65■■□□□ 1.7
UPK3B-203ENST00000394849 CDCA5Q96FF9 252 aa25.65■■□□□ 1.7
UPK3B-203ENST00000394849 KCNQ5Q9NR82 932 aa25.65■■□□□ 1.7
UPK3B-203ENST00000394849 ATP5J2-PTCD1G3V325 749 aa25.64■■□□□ 1.7
UPK3B-203ENST00000394849 RALBP1Q15311 655 aa25.63■■□□□ 1.69
UPK3B-203ENST00000394849 PKN2Q16513 984 aaKnown RBP25.63■■□□□ 1.69
UPK3B-203ENST00000394849 ANKIB1Q9P2G1 1089 aa25.63■■□□□ 1.69
UPK3B-203ENST00000394849 SCN9AQ15858 1988 aa25.63■■□□□ 1.69
UPK3B-203ENST00000394849 PITPNM2Q9BZ72 1349 aa25.63■■□□□ 1.69
UPK3B-203ENST00000394849 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
UPK3B-203ENST00000394849 SOX10P56693 466 aa25.62■■□□□ 1.69
UPK3B-203ENST00000394849 KRT24Q2M2I5 525 aa25.62■■□□□ 1.69
UPK3B-203ENST00000394849 GGA1Q9UJY5 639 aa25.62■■□□□ 1.69
UPK3B-203ENST00000394849 UFL1O94874 794 aa25.61■■□□□ 1.69
UPK3B-203ENST00000394849 RSBN1LQ6PCB5 846 aaPredicted RBP25.61■■□□□ 1.69
UPK3B-203ENST00000394849 ZBTB38Q8NAP3 1195 aaPredicted RBP25.61■■□□□ 1.69
UPK3B-203ENST00000394849 PAPPA2Q9BXP8 1791 aa25.6■■□□□ 1.69
UPK3B-203ENST00000394849 SCARF1Q14162 830 aa25.6■■□□□ 1.69
UPK3B-203ENST00000394849 ANGEL2Q5VTE6 544 aaKnown RBP25.6■■□□□ 1.69
UPK3B-203ENST00000394849 RASAL3Q86YV0 1011 aa25.6■■□□□ 1.69
UPK3B-203ENST00000394849 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
UPK3B-203ENST00000394849 LAS1LQ9Y4W2 734 aaKnown RBP25.6■■□□□ 1.69
UPK3B-203ENST00000394849 PSME4Q14997 1843 aa25.59■■□□□ 1.69
UPK3B-203ENST00000394849 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
UPK3B-203ENST00000394849 USP17L8P0C7I0 530 aa25.58■■□□□ 1.69
UPK3B-203ENST00000394849 NEUROD2Q15784 382 aa25.58■■□□□ 1.69
UPK3B-203ENST00000394849 CCDC152Q4G0S7 254 aa25.58■■□□□ 1.69
UPK3B-203ENST00000394849 PRPF38BQ5VTL8 546 aaKnown RBP25.58■■□□□ 1.69
UPK3B-203ENST00000394849 GOLGA2Q08379 1002 aa25.57■■□□□ 1.68
UPK3B-203ENST00000394849 RIC3Q7Z5B4 369 aa25.57■■□□□ 1.68
UPK3B-203ENST00000394849 PODNQ7Z5L7 613 aa25.57■■□□□ 1.68
UPK3B-203ENST00000394849 RUNDC1Q96C34 613 aa25.56■■□□□ 1.68
UPK3B-203ENST00000394849 MYOZ2Q9NPC6 264 aa25.56■■□□□ 1.68
UPK3B-203ENST00000394849 TRIM35Q9UPQ4 493 aa25.56■■□□□ 1.68
UPK3B-203ENST00000394849 ASTN2O75129 1339 aaPredicted RBP25.56■■□□□ 1.68
UPK3B-203ENST00000394849 COL4A1P02462 1669 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 NOM1Q5C9Z4 860 aaKnown RBP25.55■■□□□ 1.68
UPK3B-203ENST00000394849 DUSP27Q5VZP5 1158 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 CCDC191Q8NCU4 936 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 GMLQ99445 158 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 HDAC9Q9UKV0 1011 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 XDHP47989 1333 aa25.55■■□□□ 1.68
UPK3B-203ENST00000394849 USP17L3A6NCW0 530 aa25.54■■□□□ 1.68
UPK3B-203ENST00000394849 USP17L4A6NCW7 530 aa25.54■■□□□ 1.68
UPK3B-203ENST00000394849 USP17L1Q7RTZ2 530 aa25.54■■□□□ 1.68
UPK3B-203ENST00000394849 SEC31BQ9NQW1 1179 aa25.54■■□□□ 1.68
UPK3B-203ENST00000394849 HPS5Q9UPZ3 1129 aa25.54■■□□□ 1.68
UPK3B-203ENST00000394849 PDE8AO60658 829 aa25.53■■□□□ 1.68
UPK3B-203ENST00000394849 PCCAP05165 728 aaPredicted RBP25.53■■□□□ 1.68
UPK3B-203ENST00000394849 ATP2B4P23634 1241 aa25.53■■□□□ 1.68
UPK3B-203ENST00000394849 MMP14P50281 582 aa25.53■■□□□ 1.68
UPK3B-203ENST00000394849 CCDC146Q8IYE0 955 aa25.52■■□□□ 1.68
UPK3B-203ENST00000394849 CHMP4AQ9BY43 222 aa25.52■■□□□ 1.68
UPK3B-203ENST00000394849 ANKRD18AQ8IVF6 992 aa25.51■■□□□ 1.67
UPK3B-203ENST00000394849 NF2P35240 595 aa25.5■■□□□ 1.67
UPK3B-203ENST00000394849 TM4SF4P48230 202 aa25.5■■□□□ 1.67
UPK3B-203ENST00000394849 OGFOD1Q8N543 542 aa25.5■■□□□ 1.67
UPK3B-203ENST00000394849 MYO3BQ8WXR4 1341 aa25.49■■□□□ 1.67
UPK3B-203ENST00000394849 WDR43Q15061 677 aaKnown RBP eCLIP25.49■■□□□ 1.67
UPK3B-203ENST00000394849 ZNF296Q8WUU4 475 aaPredicted RBP25.49■■□□□ 1.67
UPK3B-203ENST00000394849 CDC5LQ99459 802 aaKnown RBP25.49■■□□□ 1.67
UPK3B-203ENST00000394849 CWC25Q9NXE8 425 aaPredicted RBP25.49■■□□□ 1.67
UPK3B-203ENST00000394849 DDX58O95786 925 aaKnown RBP25.47■■□□□ 1.67
UPK3B-203ENST00000394849 SREBF2Q12772 1141 aa25.47■■□□□ 1.67
UPK3B-203ENST00000394849 TTLL12Q14166 644 aaPredicted RBP25.47■■□□□ 1.67
UPK3B-203ENST00000394849 MYD88Q99836 296 aa25.47■■□□□ 1.67
UPK3B-203ENST00000394849 MBIPQ9NS73 344 aa25.47■■□□□ 1.67
UPK3B-203ENST00000394849 MED23Q9ULK4 1368 aa25.46■■□□□ 1.67
UPK3B-203ENST00000394849 MYBBP1AQ9BQG0 1328 aaKnown RBP25.46■■□□□ 1.67
UPK3B-203ENST00000394849 UBE2Q2LH0YL09 131 aa25.46■■□□□ 1.67
UPK3B-203ENST00000394849 TBC1D8O95759 1140 aa25.46■■□□□ 1.67
UPK3B-203ENST00000394849 CFHR5Q9BXR6 569 aa25.46■■□□□ 1.67
UPK3B-203ENST00000394849 GPR25O00155 361 aa25.45■■□□□ 1.66
UPK3B-203ENST00000394849 CALD1Q05682 793 aaKnown RBP25.45■■□□□ 1.66
UPK3B-203ENST00000394849 FBXO46Q6PJ61 603 aaPredicted RBP25.45■■□□□ 1.66
UPK3B-203ENST00000394849 MOB2Q70IA6 237 aa25.44■■□□□ 1.66
UPK3B-203ENST00000394849 METTL22Q9BUU2 404 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms