RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MTMR7Q9Y216 660 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
NFKB1-202ENST00000394820 HSPA4P34932 840 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 ANAPC15P60006 121 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 SEC62Q99442 399 aaKnown RBP15.48■□□□□ 0.07
NFKB1-202ENST00000394820 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 SLC52A2Q9HAB3 445 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 ERBB3P21860 1342 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 TPM3P06753 285 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 CFAP100Q494V2 611 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 Q6ZUG5 572 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
NFKB1-202ENST00000394820 GOLIM4O00461 696 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 ALDH1L1O75891 902 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 TFCP2Q12800 502 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 MTMR6Q9Y217 621 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 A0A1B0GVL5 298 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 ZBTB22O15209 634 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 SASH1O94885 1247 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 A1BGP04217 495 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
NFKB1-202ENST00000394820 IGKV5-2P06315 115 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 MARCKSP29966 332 aaPredicted RBP15.47■□□□□ 0.07
NFKB1-202ENST00000394820 SLFNL1Q499Z3 407 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 LMBR1LQ6UX01 489 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 RXRAP19793 462 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 APOBRQ0VD83 1088 aa15.47■□□□□ 0.07
NFKB1-202ENST00000394820 NPHP3Q7Z494 1330 aa15.46■□□□□ 0.07
NFKB1-202ENST00000394820 SALL3Q9BXA9 1300 aa15.46■□□□□ 0.07
NFKB1-202ENST00000394820 SNRPA1P09661 255 aaKnown RBP15.46■□□□□ 0.07
NFKB1-202ENST00000394820 ELF2Q15723 593 aa15.46■□□□□ 0.07
NFKB1-202ENST00000394820 CEP57L1Q8IYX8 460 aa15.46■□□□□ 0.07
NFKB1-202ENST00000394820 PHKG2P15735 406 aa15.46■□□□□ 0.07
NFKB1-202ENST00000394820 SH2B1Q9NRF2 756 aaPredicted RBP15.46■□□□□ 0.07
NFKB1-202ENST00000394820 RAD50Q92878 1312 aa15.46■□□□□ 0.06
NFKB1-202ENST00000394820 PXDNQ92626 1479 aa15.46■□□□□ 0.06
NFKB1-202ENST00000394820 CCDC69A6NI79 296 aa15.46■□□□□ 0.06
NFKB1-202ENST00000394820 RALYLQ86SE5 291 aaKnown RBP15.46■□□□□ 0.06
NFKB1-202ENST00000394820 SMAP1Q8IYB5 467 aaPredicted RBP15.46■□□□□ 0.06
NFKB1-202ENST00000394820 LSG1Q9H089 658 aaKnown RBP15.46■□□□□ 0.06
NFKB1-202ENST00000394820 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.06
NFKB1-202ENST00000394820 TEX35Q5T0J7 233 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 EVI5LQ96CN4 794 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 ZNF594Q96JF6 807 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-202ENST00000394820 ARHGAP23Q9P227 1491 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 NPHP4O75161 1426 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-202ENST00000394820 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 NEURL1BA8MQ27 555 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 HOXB7P09629 217 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 GCKRQ14397 625 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 SYT10Q6XYQ8 523 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 DNAI1Q9UI46 699 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 PIK3C2AO00443 1686 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.06
NFKB1-202ENST00000394820 TIMM10P62072 90 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 UBXN4Q92575 508 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
NFKB1-202ENST00000394820 CYP27B1O15528 508 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 KLHL10Q6JEL2 608 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 NEK1Q96PY6 1258 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 CFAP45Q9UL16 551 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 TMEM94Q12767 1356 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 TTLL7Q6ZT98 887 aa15.44■□□□□ 0.06
NFKB1-202ENST00000394820 NAT10Q9H0A0 1025 aaKnown RBP15.44■□□□□ 0.06
NFKB1-202ENST00000394820 ZNF215Q9UL58 517 aaPredicted RBP15.44■□□□□ 0.06
NFKB1-202ENST00000394820 DHX37Q8IY37 1157 aaKnown RBP15.43■□□□□ 0.06
NFKB1-202ENST00000394820 SLIT1O75093 1534 aa15.43■□□□□ 0.06
NFKB1-202ENST00000394820 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
NFKB1-202ENST00000394820 CUL4AQ13619 759 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
NFKB1-202ENST00000394820 ANKRD1Q15327 319 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 CACTINQ8WUQ7 758 aaKnown RBP15.42■□□□□ 0.06
NFKB1-202ENST00000394820 GPTP24298 496 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 GOLGA8FQ08AF8 430 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 GOLGA8DPQ0D2H9 430 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 LEO1Q8WVC0 666 aaPredicted RBP15.42■□□□□ 0.06
NFKB1-202ENST00000394820 KAZALD1Q96I82 304 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
NFKB1-202ENST00000394820 CCDC171Q6TFL3 1326 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 SNW1Q13573 536 aaKnown RBP15.42■□□□□ 0.06
NFKB1-202ENST00000394820 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
NFKB1-202ENST00000394820 KIAA1524Q8TCG1 905 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 METTL22Q9BUU2 404 aaPredicted RBP15.41■□□□□ 0.06
NFKB1-202ENST00000394820 IFNKQ9P0W0 207 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 TTC41PQ6P2S7 1318 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 SLC27A2O14975 620 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 PDE4CQ08493 712 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 ZNF589Q86UQ0 364 aaPredicted RBP15.41■□□□□ 0.06
NFKB1-202ENST00000394820 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 ZSCAN25Q6NSZ9 544 aa15.41■□□□□ 0.06
NFKB1-202ENST00000394820 ZNF75DP51815 510 aa15.4■□□□□ 0.06
NFKB1-202ENST00000394820 TRDNQ13061 729 aa15.4■□□□□ 0.06
NFKB1-202ENST00000394820 PDIA6Q15084 440 aa15.4■□□□□ 0.06
NFKB1-202ENST00000394820 AP5Z1O43299 807 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms