RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 GCKRQ14397 625 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 TEX13AQ9BXU3 409 aaPredicted RBP8.58□□□□□ -1.04
RTN4-205ENST00000394609 AFF2P51816 1311 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 GLI3P10071 1580 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 TJAP1Q5JTD0 557 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 Q6ZNB5 142 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 KAT6BQ8WYB5 2073 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 SURF6O75683 361 aaKnown RBP8.57□□□□□ -1.04
RTN4-205ENST00000394609 CYP19A1P11511 503 aaPredicted RBP8.57□□□□□ -1.04
RTN4-205ENST00000394609 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 KAZALD1Q96I82 304 aa8.57□□□□□ -1.04
RTN4-205ENST00000394609 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
RTN4-205ENST00000394609 NUDT18Q6ZVK8 323 aa8.56□□□□□ -1.04
RTN4-205ENST00000394609 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
RTN4-205ENST00000394609 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
RTN4-205ENST00000394609 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
RTN4-205ENST00000394609 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
RTN4-205ENST00000394609 UTYO14607 1347 aa8.56□□□□□ -1.04
RTN4-205ENST00000394609 A0A087WZG4 1122 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 SIK1P57059 783 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 MTRQ99707 1265 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 LRRCC1Q9C099 1032 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 CDHR5Q9HBB8 845 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 NWD2Q9ULI1 1742 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 ZBTB1Q9Y2K1 713 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 KCNQ4P56696 695 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 TSHZ3Q63HK5 1081 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
RTN4-205ENST00000394609 HDAC5Q9UQL6 1122 aa8.55□□□□□ -1.04
RTN4-205ENST00000394609 IBTKQ9P2D0 1353 aaPredicted RBP8.54□□□□□ -1.04
RTN4-205ENST00000394609 UBR2Q8IWV8 1755 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 PAPPAQ13219 1627 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 MTX1Q13505 466 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 ITPK1Q13572 414 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 BMP2KLQ5H9B9 411 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 KIF6Q6ZMV9 814 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
RTN4-205ENST00000394609 PALLDQ8WX93 1383 aa8.54□□□□□ -1.04
RTN4-205ENST00000394609 RNF40O75150 1001 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 HLFQ16534 295 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 INTS5Q6P9B9 1019 aaKnown RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 TRPC5Q9UL62 973 aaPredicted RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 TBC1D2BQ9UPU7 963 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 GPTP24298 496 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
RTN4-205ENST00000394609 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 SIL1Q9H173 461 aa8.53□□□□□ -1.04
RTN4-205ENST00000394609 ITGB4P16144 1822 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 H7C1W4 665 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 RAB11FIP3O75154 756 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 PDE1AP54750 535 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 CASP7P55210 303 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 TTC22Q5TAA0 569 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 DZIP3Q86Y13 1208 aaKnown RBP8.52□□□□□ -1.05
RTN4-205ENST00000394609 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
RTN4-205ENST00000394609 PRR14Q9BWN1 585 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 CCDC87Q9NVE4 849 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 WNK3Q9BYP7 1800 aa8.52□□□□□ -1.05
RTN4-205ENST00000394609 DOT1LQ8TEK3 1739 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 GGCXP38435 758 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 IL6STP40189 918 aaPredicted RBP8.51□□□□□ -1.05
RTN4-205ENST00000394609 MFAP1P55081 439 aaKnown RBP8.51□□□□□ -1.05
RTN4-205ENST00000394609 LMBR1LQ6UX01 489 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 KIF1BPQ96EK5 621 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 ISCA1Q9BUE6 129 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 CHMP3Q9Y3E7 222 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
RTN4-205ENST00000394609 LAMB4A4D0S4 1761 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 SDSP20132 328 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 MX1P20591 662 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 EIF5P55010 431 aaKnown RBP8.51□□□□□ -1.05
RTN4-205ENST00000394609 FOXO4P98177 505 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 HSP90AB4PQ58FF6 505 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 PADI6Q6TGC4 694 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
RTN4-205ENST00000394609 SMIM5Q71RC9 77 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
RTN4-205ENST00000394609 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms