RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 SNRKQ9NRH2 765 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 AKAP2Q9Y2D5 859 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 CCDC129Q6ZRS4 1044 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 KBTBD3Q8NAB2 608 aa21.63■■□□□ 1.05
CLDND1-204ENST00000394185 RPS6KA4O75676 772 aa21.62■■□□□ 1.05
CLDND1-204ENST00000394185 ATP2B3Q16720 1220 aa21.62■■□□□ 1.05
CLDND1-204ENST00000394185 RC3H1Q5TC82 1133 aaKnown RBP21.62■■□□□ 1.05
CLDND1-204ENST00000394185 C3orf67Q6ZVT6 689 aa21.62■■□□□ 1.05
CLDND1-204ENST00000394185 AK7Q96M32 723 aa21.62■■□□□ 1.05
CLDND1-204ENST00000394185 COL4A1P02462 1669 aa21.62■■□□□ 1.05
CLDND1-204ENST00000394185 SNAP23O00161 211 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 ERFEQ4G0M1 354 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 PI16Q6UXB8 463 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 LRRC4BQ9NT99 713 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 RBM8AQ9Y5S9 174 aaKnown RBP21.61■■□□□ 1.05
CLDND1-204ENST00000394185 CPA1P15085 419 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 MAP4K1Q92918 833 aa21.61■■□□□ 1.05
CLDND1-204ENST00000394185 LRP5O75197 1615 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 LY75O60449 1722 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLDND1-204ENST00000394185 NECTIN1Q15223 517 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 ADCK5Q3MIX3 580 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 TTC39AQ5SRH9 613 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 PDE8BO95263 885 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 COL9A3Q14050 684 aaPredicted RBP21.6■■□□□ 1.05
CLDND1-204ENST00000394185 ZGPATQ8N5A5 531 aaKnown RBP21.6■■□□□ 1.05
CLDND1-204ENST00000394185 NARFQ9UHQ1 456 aa21.6■■□□□ 1.05
CLDND1-204ENST00000394185 SCN7AQ01118 1682 aa21.59■■□□□ 1.05
CLDND1-204ENST00000394185 PHF14O94880 888 aa21.59■■□□□ 1.05
CLDND1-204ENST00000394185 CCDC158Q5M9N0 1113 aa21.59■■□□□ 1.05
CLDND1-204ENST00000394185 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
CLDND1-204ENST00000394185 TMX3Q96JJ7 454 aa21.59■■□□□ 1.05
CLDND1-204ENST00000394185 TAF6LQ9Y6J9 622 aa21.59■■□□□ 1.05
CLDND1-204ENST00000394185 TAF5LO75529 589 aa21.58■■□□□ 1.05
CLDND1-204ENST00000394185 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
CLDND1-204ENST00000394185 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.05
CLDND1-204ENST00000394185 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.04
CLDND1-204ENST00000394185 CCDC152Q4G0S7 254 aa21.58■■□□□ 1.04
CLDND1-204ENST00000394185 RFX7Q2KHR2 1363 aa21.57■■□□□ 1.04
CLDND1-204ENST00000394185 KCNJ4P48050 445 aa21.57■■□□□ 1.04
CLDND1-204ENST00000394185 CREB3L3Q68CJ9 461 aa21.57■■□□□ 1.04
CLDND1-204ENST00000394185 CCDC24Q8N4L8 307 aa21.57■■□□□ 1.04
CLDND1-204ENST00000394185 LARP6Q9BRS8 491 aaKnown RBP21.57■■□□□ 1.04
CLDND1-204ENST00000394185 ABCC12Q96J65 1359 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
CLDND1-204ENST00000394185 ZAP70P43403 619 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 FAM196AQ6ZSG2 479 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
CLDND1-204ENST00000394185 KCNB2Q92953 911 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 MPHOSPH8Q99549 860 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 C4BP0C0L5 1744 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 LAMB2P55268 1798 aa21.56■■□□□ 1.04
CLDND1-204ENST00000394185 SLC27A2O14975 620 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 ZPR1O75312 459 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 MCAMP43121 646 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 BRWD3Q6RI45 1802 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 TRIM37O94972 964 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 MCMDC2Q4G0Z9 681 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 KRT27Q7Z3Y8 459 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 JAKMIP1Q96N16 626 aaKnown RBP21.55■■□□□ 1.04
CLDND1-204ENST00000394185 TTC14Q96N46 770 aa21.55■■□□□ 1.04
CLDND1-204ENST00000394185 PHKA1P46020 1223 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 MROH5Q6ZUA9 1318 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 FGFR2P21802 821 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 PKP1Q13835 747 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 VPS53Q5VIR6 699 aa21.54■■□□□ 1.04
CLDND1-204ENST00000394185 CIZ1Q9ULV3 898 aaPredicted RBP21.54■■□□□ 1.04
CLDND1-204ENST00000394185 RAB3GAP1Q15042 981 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 PUM3Q15397 648 aaKnown RBP21.53■■□□□ 1.04
CLDND1-204ENST00000394185 TNPO1Q92973 898 aaKnown RBP21.53■■□□□ 1.04
CLDND1-204ENST00000394185 SETDB2Q96T68 719 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 AK2P54819 239 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 ZMYM1Q5SVZ6 1142 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 CCDC102BQ68D86 513 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 RTL9Q8NET4 1388 aa21.53■■□□□ 1.04
CLDND1-204ENST00000394185 TAF1P21675 1872 aa21.52■■□□□ 1.04
CLDND1-204ENST00000394185 GTF2E1P29083 439 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-204ENST00000394185 MCM2P49736 904 aa21.52■■□□□ 1.04
CLDND1-204ENST00000394185 WTIPA6NIX2 430 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-204ENST00000394185 RNF113AO15541 343 aaKnown RBP21.51■■□□□ 1.03
CLDND1-204ENST00000394185 SSFA2P28290 1259 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 IGHMBP2P38935 993 aaKnown RBP21.51■■□□□ 1.03
CLDND1-204ENST00000394185 LPIN2Q92539 896 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 MAST3O60307 1309 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 M0R2C6 588 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-204ENST00000394185 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-204ENST00000394185 OSBP2Q969R2 916 aa21.51■■□□□ 1.03
CLDND1-204ENST00000394185 HSP90B1P14625 803 aaKnown RBP21.5■■□□□ 1.03
CLDND1-204ENST00000394185 RFC4P35249 363 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 TRAPPC3LQ5T215 181 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 RUFY3Q7L099 469 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 ZSWIM6Q9HCJ5 1215 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 AKAP11Q9UKA4 1901 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 CYP2E1P05181 493 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-204ENST00000394185 CHRNDQ07001 517 aa21.5■■□□□ 1.03
CLDND1-204ENST00000394185 HELLSQ9NRZ9 838 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms