RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 FER1L6Q2WGJ9 1857 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 MAST2Q6P0Q8 1798 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 RRAGDQ9NQL2 400 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 SEC31BQ9NQW1 1179 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 HAUS7Q99871 368 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 ADAMTS3O15072 1205 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 ATP5JP18859 108 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 GIGYF2Q6Y7W6 1299 aaKnown RBP10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 MAP3K15Q6ZN16 1313 aa10.34□□□□□ -0.75
GAPVD1-204ENST00000394083 SLC27A2O14975 620 aa10.33□□□□□ -0.75
GAPVD1-204ENST00000394083 TM4SF1P30408 202 aa10.33□□□□□ -0.75
GAPVD1-204ENST00000394083 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.75
GAPVD1-204ENST00000394083 PUS7LQ9H0K6 701 aaKnown RBP10.33□□□□□ -0.75
GAPVD1-204ENST00000394083 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.75
GAPVD1-204ENST00000394083 NTSR2O95665 410 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 NEK4P51957 841 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 PROM2Q8N271 834 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 MAST3O60307 1309 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 ATRNO75882 1429 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 ANTXR2P58335 489 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 C9orf78Q9NZ63 289 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-204ENST00000394083 UNC80Q8N2C7 3258 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 NECAB1Q8N987 351 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 AGXT2Q9BYV1 514 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 ANO2Q9NQ90 1003 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 GPTP24298 496 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 NOL8Q76FK4 1167 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-204ENST00000394083 QSER1Q2KHR3 1735 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 TRAK2O60296 914 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 CHMP5Q9NZZ3 219 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 HCLS1P14317 486 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 CRKLP46109 303 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 RABEP1Q15276 862 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 GZF1Q9H116 711 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 TRIM6-TRIM34B2RNG4 842 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-204ENST00000394083 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 FUCA2Q9BTY2 467 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 PIH1D3Q9NQM4 214 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 HPS5Q9UPZ3 1129 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 MYH1P12882 1939 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 EXOSC10Q01780 885 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 ZBTB38Q8NAP3 1195 aaPredicted RBP10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 CCDC191Q8NCU4 936 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 GRIK5Q16478 980 aa10.3□□□□□ -0.76
GAPVD1-204ENST00000394083 JAK2O60674 1132 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 BRCA1P38398 1863 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 HMMRO75330 724 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 COL4A5P29400 1685 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 CCDC9Q9Y3X0 531 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 MTMR6Q9Y217 621 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 ARFGEF1Q9Y6D6 1849 aa10.29□□□□□ -0.76
GAPVD1-204ENST00000394083 PCCAP05165 728 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 FOXD4L5Q5VV16 416 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 FOXD4L4Q8WXT5 416 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 CDHR2Q9BYE9 1310 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 PHKA1P46020 1223 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 ANAPC15P60006 121 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 CHST3Q7LGC8 479 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 CCDC24Q8N4L8 307 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 PSME4Q14997 1843 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 SNED1Q8TER0 1413 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 EYA2O00167 538 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 SYT1P21579 422 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 CDC37L1Q7L3B6 337 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 NAV1Q8NEY1 1877 aa10.28□□□□□ -0.76
GAPVD1-204ENST00000394083 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms