RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 RAB11FIP4Q86YS3 637 aa13.66□□□□□ -0.22
CCDC57-205ENST00000392346 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
CCDC57-205ENST00000392346 C16orf45Q96MC5 204 aaPredicted RBP13.66□□□□□ -0.22
CCDC57-205ENST00000392346 AOX1Q06278 1338 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 ZC3H6P61129 1189 aaKnown RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 USP16Q9Y5T5 823 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 DRC7Q8IY82 874 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 BTG4Q9NY30 223 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 SLIT2O94813 1529 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 RIOK3O14730 519 aaKnown RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CCDC57-205ENST00000392346 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 MYRIPQ8NFW9 859 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
CCDC57-205ENST00000392346 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 TYRO3Q06418 890 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 MYD88Q99836 296 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 LTN1O94822 1766 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 GRM8O00222 908 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
CCDC57-205ENST00000392346 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-205ENST00000392346 VPS72Q15906 364 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-205ENST00000392346 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
CCDC57-205ENST00000392346 MCM5P33992 734 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 TERF1P54274 439 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC57-205ENST00000392346 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 EVI5LQ96CN4 794 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-205ENST00000392346 IP6K1Q92551 441 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
CCDC57-205ENST00000392346 NCOA5Q9HCD5 579 aaKnown RBP13.63□□□□□ -0.23
CCDC57-205ENST00000392346 PSEN1P49768 467 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 MMP14P50281 582 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 C1orf141Q5JVX7 400 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 SPATA32Q96LK8 384 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 ARMCX6Q7L4S7 300 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 BRF1Q92994 677 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 TTC41PQ6P2S7 1318 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 GOLGA6L4A6NEF3 574 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 KRT85P78386 507 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 XAGE3Q8WTP9 111 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
CCDC57-205ENST00000392346 DBNLQ9UJU6 430 aaKnown RBP13.62□□□□□ -0.23
CCDC57-205ENST00000392346 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 KIAA1524Q8TCG1 905 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 TRIM5Q9C035 493 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC192P0DO97 292 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 TFCP2Q12800 502 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-205ENST00000392346 DBNDD2Q9BQY9 259 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-205ENST00000392346 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
CCDC57-205ENST00000392346 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 EVA1CP58658 441 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 LEO1Q8WVC0 666 aaPredicted RBP13.6□□□□□ -0.23
CCDC57-205ENST00000392346 GJB4Q9NTQ9 266 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.6□□□□□ -0.23
CCDC57-205ENST00000392346 PTPN21Q16825 1174 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 Q6ZUG5 572 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 SEPT12Q8IYM1 358 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
CCDC57-205ENST00000392346 USP27XA6NNY8 438 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 RPS6KB1P23443 525 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 PDIA6Q15084 440 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms