RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PDILTQ8N807 584 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 SSRP1Q08945 709 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
PTPRN2-202ENST00000389416 MAGEB6P1A0A0J9YX57 407 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 UFL1O94874 794 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 PPRC1Q5VV67 1664 aaKnown RBP15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 INO80Q9ULG1 1556 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 SMC2O95347 1197 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 WTAPQ15007 396 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 HOMER1Q86YM7 354 aa15.3■□□□□ 0.04
PTPRN2-202ENST00000389416 CYP27B1O15528 508 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 MPNDQ8N594 471 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 ESR2Q92731 530 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 NLRP5P59047 1200 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 NUP62CLQ9H1M0 184 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 CLTCQ00610 1675 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 LDHBP07195 334 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 MCM9Q9NXL9 1143 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 MYO1BO43795 1136 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 TRIM37O94972 964 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 EPS15P42566 896 aa15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 RBM26Q5T8P6 1007 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 CDK12Q9NYV4 1490 aaPredicted RBP15.29■□□□□ 0.04
PTPRN2-202ENST00000389416 STX6O43752 255 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 CAMK4Q16566 473 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 HIBADHP31937 336 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 WDR78Q5VTH9 848 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 ZNF853P0CG23 659 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 TSPY3P0CV98 308 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 TSPY8P0CW00 308 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 ANAPC15P60006 121 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 Q6ZUG5 572 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 JDP2Q8WYK2 163 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 PIGBQ92521 554 aa15.28■□□□□ 0.04
PTPRN2-202ENST00000389416 KIDINS220Q9ULH0 1771 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 KIF5BP33176 963 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 KRT23Q9C075 422 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 MADDQ8WXG6 1647 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 ZBTB43O43298 467 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 MBD4O95243 580 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
PTPRN2-202ENST00000389416 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.03
PTPRN2-202ENST00000389416 EYA3Q99504 573 aa15.27■□□□□ 0.03
PTPRN2-202ENST00000389416 ERBB4Q15303 1308 aa15.27■□□□□ 0.03
PTPRN2-202ENST00000389416 CAMSAP1Q5T5Y3 1602 aa15.27■□□□□ 0.03
PTPRN2-202ENST00000389416 DHX8Q14562 1220 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 TMEM132AQ24JP5 1023 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 EDC3Q96F86 508 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 OFD1O75665 1012 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 CPA1P15085 419 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 USPL1Q5W0Q7 1092 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 SSH3Q8TE77 659 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 PRC1O43663 620 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 BAG6P46379 1132 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 BCORL1Q5H9F3 1711 aa15.26■□□□□ 0.03
PTPRN2-202ENST00000389416 KDRP35968 1356 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 IFIT1BQ5T764 474 aaKnown RBP15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 LPIN2Q92539 896 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 CEP131Q9UPN4 1083 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 SYCE3A1L190 88 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 DENND2AQ9ULE3 1009 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 SPC24Q8NBT2 197 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 CTSWP56202 376 aa15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
PTPRN2-202ENST00000389416 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 SERPINC1P01008 464 aa15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 AGLP35573 1532 aa15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 FILIP1LQ4L180 1135 aa15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
PTPRN2-202ENST00000389416 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms