RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 SPATA31A1Q5TZJ5 1347 aa20.56■□□□□ 0.88
PDX1-201ENST00000381033 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
PDX1-201ENST00000381033 CAVIN1Q6NZI2 390 aaKnown RBP20.56■□□□□ 0.88
PDX1-201ENST00000381033 TRIM28Q13263 835 aaKnown RBP20.56■□□□□ 0.88
PDX1-201ENST00000381033 SKOR2Q2VWA4 1001 aaPredicted RBP20.56■□□□□ 0.88
PDX1-201ENST00000381033 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
PDX1-201ENST00000381033 PAG1Q9NWQ8 432 aa20.56■□□□□ 0.88
PDX1-201ENST00000381033 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
PDX1-201ENST00000381033 RPAP1Q9BWH6 1393 aaPredicted RBP20.56■□□□□ 0.88
PDX1-201ENST00000381033 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
PDX1-201ENST00000381033 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
PDX1-201ENST00000381033 KCNQ2O43526 872 aa20.55■□□□□ 0.88
PDX1-201ENST00000381033 SCARF1Q14162 830 aa20.55■□□□□ 0.88
PDX1-201ENST00000381033 KBTBD3Q8NAB2 608 aa20.55■□□□□ 0.88
PDX1-201ENST00000381033 CEP126Q9P2H0 1117 aa20.55■□□□□ 0.88
PDX1-201ENST00000381033 UBN2Q6ZU65 1347 aa20.54■□□□□ 0.88
PDX1-201ENST00000381033 KCNQ4P56696 695 aa20.54■□□□□ 0.88
PDX1-201ENST00000381033 FKBP4Q02790 459 aaKnown RBP eCLIP20.54■□□□□ 0.88
PDX1-201ENST00000381033 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
PDX1-201ENST00000381033 IFIT1P09914 478 aaKnown RBP20.54■□□□□ 0.88
PDX1-201ENST00000381033 TTLL11Q8NHH1 800 aa20.54■□□□□ 0.88
PDX1-201ENST00000381033 TRMT112Q9UI30 125 aaKnown RBP20.54■□□□□ 0.88
PDX1-201ENST00000381033 TCHHQ07283 1943 aa20.54■□□□□ 0.88
PDX1-201ENST00000381033 CSF1RP07333 972 aa20.53■□□□□ 0.88
PDX1-201ENST00000381033 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
PDX1-201ENST00000381033 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
PDX1-201ENST00000381033 ITGA6P23229 1130 aa20.53■□□□□ 0.88
PDX1-201ENST00000381033 L1TD1Q5T7N2 865 aaKnown RBP20.53■□□□□ 0.88
PDX1-201ENST00000381033 XAGE2Q96GT9 111 aa20.53■□□□□ 0.88
PDX1-201ENST00000381033 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
PDX1-201ENST00000381033 DOT1LQ8TEK3 1739 aa20.52■□□□□ 0.88
PDX1-201ENST00000381033 MCMDC2Q4G0Z9 681 aa20.52■□□□□ 0.88
PDX1-201ENST00000381033 HSP90AB3PQ58FF7 597 aa20.52■□□□□ 0.88
PDX1-201ENST00000381033 GRPEL1Q9HAV7 217 aa20.52■□□□□ 0.88
PDX1-201ENST00000381033 IRS4O14654 1257 aaPredicted RBP20.52■□□□□ 0.87
PDX1-201ENST00000381033 CIAO1O76071 339 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 CYP21A2P08686 494 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 SYT1P21579 422 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 ATP6V1AP38606 617 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 SMIM5Q71RC9 77 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.87
PDX1-201ENST00000381033 COL22A1Q8NFW1 1626 aaPredicted RBP20.51■□□□□ 0.87
PDX1-201ENST00000381033 PLCH1Q4KWH8 1693 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 STK3Q13188 491 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 CNPY4Q8N129 248 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
PDX1-201ENST00000381033 GJB2P29033 226 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 ITPK1Q13572 414 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 INTS5Q6P9B9 1019 aaKnown RBP20.51■□□□□ 0.87
PDX1-201ENST00000381033 GPR108Q9NPR9 543 aa20.51■□□□□ 0.87
PDX1-201ENST00000381033 SNAP23O00161 211 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 TOB2Q14106 344 aaPredicted RBP20.5■□□□□ 0.87
PDX1-201ENST00000381033 BLOC1S2Q6QNY1 142 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 LDHAL6AQ6ZMR3 332 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 LRP6O75581 1613 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 JCADQ9P266 1359 aa20.5■□□□□ 0.87
PDX1-201ENST00000381033 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
PDX1-201ENST00000381033 PHLPP1O60346 1717 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 SLIT2O94813 1529 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
PDX1-201ENST00000381033 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
PDX1-201ENST00000381033 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 HELBQ8NG08 1087 aaPredicted RBP20.49■□□□□ 0.87
PDX1-201ENST00000381033 PLA2G12BQ9BX93 195 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 EP400Q96L91 3159 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 RPS6KB1P23443 525 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 CTSWP56202 376 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 RNF20Q5VTR2 975 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 STOX1Q6ZVD7 989 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 RIPOR2Q9Y4F9 1068 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 NUP98P52948 1817 aa20.49■□□□□ 0.87
PDX1-201ENST00000381033 TMEM63CQ9P1W3 806 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 LOC102724428A0A0B4J2F2 783 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 PTMSP20962 102 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 IL6STP40189 918 aaPredicted RBP20.48■□□□□ 0.87
PDX1-201ENST00000381033 SIK1P57059 783 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 METTL24Q5JXM2 366 aa20.48■□□□□ 0.87
PDX1-201ENST00000381033 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 M0R2C6 588 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 STX6O43752 255 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 ZAP70P43403 619 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
PDX1-201ENST00000381033 SUSD4Q5VX71 490 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 OSBP2Q969R2 916 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.47■□□□□ 0.87
PDX1-201ENST00000381033 MRE11P49959 708 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
PDX1-201ENST00000381033 TTC39AQ5SRH9 613 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 TTLL5Q6EMB2 1281 aa20.47■□□□□ 0.87
PDX1-201ENST00000381033 MAST3O60307 1309 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
PDX1-201ENST00000381033 PSMA5P28066 241 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 CNPY2Q9Y2B0 182 aa20.46■□□□□ 0.87
PDX1-201ENST00000381033 RIC1Q4ADV7 1423 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms