RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CNNM1Q9NRU3 951 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 RIPOR2Q9Y4F9 1068 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 C21orf2O43822 256 aa23.34■■□□□ 1.33
SMN2-202ENST00000380742 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
SMN2-202ENST00000380742 MINPP1Q9UNW1 487 aa23.34■■□□□ 1.33
SMN2-202ENST00000380742 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
SMN2-202ENST00000380742 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
SMN2-202ENST00000380742 CIAO1O76071 339 aa23.33■■□□□ 1.33
SMN2-202ENST00000380742 HDAC1Q13547 482 aaPredicted RBP23.33■■□□□ 1.33
SMN2-202ENST00000380742 FBXO3Q9UK99 471 aa23.33■■□□□ 1.33
SMN2-202ENST00000380742 IGHDP01880 384 aa23.32■■□□□ 1.32
SMN2-202ENST00000380742 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
SMN2-202ENST00000380742 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
SMN2-202ENST00000380742 CHRNDQ07001 517 aa23.31■■□□□ 1.32
SMN2-202ENST00000380742 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
SMN2-202ENST00000380742 IL15P40933 162 aaPredicted RBP23.3■■□□□ 1.32
SMN2-202ENST00000380742 G3BP1Q13283 466 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMN2-202ENST00000380742 HELBQ8NG08 1087 aaPredicted RBP23.3■■□□□ 1.32
SMN2-202ENST00000380742 DCTPP1Q9H773 170 aa23.3■■□□□ 1.32
SMN2-202ENST00000380742 SASH1O94885 1247 aa23.29■■□□□ 1.32
SMN2-202ENST00000380742 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMN2-202ENST00000380742 GPSM2P81274 684 aa23.29■■□□□ 1.32
SMN2-202ENST00000380742 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
SMN2-202ENST00000380742 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
SMN2-202ENST00000380742 DUOX1Q9NRD9 1551 aa23.29■■□□□ 1.32
SMN2-202ENST00000380742 TAF5LO75529 589 aa23.28■■□□□ 1.32
SMN2-202ENST00000380742 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
SMN2-202ENST00000380742 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
SMN2-202ENST00000380742 VGLL2Q8N8G2 317 aa23.28■■□□□ 1.32
SMN2-202ENST00000380742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.28■■□□□ 1.32
SMN2-202ENST00000380742 CCDC88AQ3V6T2 1871 aa23.28■■□□□ 1.32
SMN2-202ENST00000380742 CCDC93Q567U6 631 aa23.27■■□□□ 1.32
SMN2-202ENST00000380742 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
SMN2-202ENST00000380742 TMX4Q9H1E5 349 aaPredicted RBP23.27■■□□□ 1.32
SMN2-202ENST00000380742 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
SMN2-202ENST00000380742 WTIPA6NIX2 430 aaPredicted RBP23.27■■□□□ 1.31
SMN2-202ENST00000380742 OS9Q13438 667 aaPredicted RBP23.27■■□□□ 1.31
SMN2-202ENST00000380742 SOGA3Q5TF21 947 aa23.27■■□□□ 1.31
SMN2-202ENST00000380742 ANKRD2Q9GZV1 360 aa23.27■■□□□ 1.31
SMN2-202ENST00000380742 PODXL2Q9NZ53 605 aa23.27■■□□□ 1.31
SMN2-202ENST00000380742 ANKIB1Q9P2G1 1089 aa23.27■■□□□ 1.31
SMN2-202ENST00000380742 PDE8BO95263 885 aa23.26■■□□□ 1.31
SMN2-202ENST00000380742 TFCP2Q12800 502 aa23.26■■□□□ 1.31
SMN2-202ENST00000380742 HSP90AB4PQ58FF6 505 aa23.26■■□□□ 1.31
SMN2-202ENST00000380742 MPNDQ8N594 471 aa23.26■■□□□ 1.31
SMN2-202ENST00000380742 XDHP47989 1333 aa23.25■■□□□ 1.31
SMN2-202ENST00000380742 SNAP23O00161 211 aa23.25■■□□□ 1.31
SMN2-202ENST00000380742 APBB1O00213 710 aa23.25■■□□□ 1.31
SMN2-202ENST00000380742 DPP8Q6V1X1 898 aaPredicted RBP23.25■■□□□ 1.31
SMN2-202ENST00000380742 RTKN2Q8IZC4 609 aa23.25■■□□□ 1.31
SMN2-202ENST00000380742 CEP126Q9P2H0 1117 aa23.25■■□□□ 1.31
SMN2-202ENST00000380742 SBF1O95248 1867 aa23.24■■□□□ 1.31
SMN2-202ENST00000380742 RAB11FIP3O75154 756 aa23.24■■□□□ 1.31
SMN2-202ENST00000380742 GRIPAP1Q4V328 841 aa23.24■■□□□ 1.31
SMN2-202ENST00000380742 TBC1D16Q8TBP0 767 aa23.24■■□□□ 1.31
SMN2-202ENST00000380742 POLLQ9UGP5 575 aa23.24■■□□□ 1.31
SMN2-202ENST00000380742 ARAP2Q8WZ64 1704 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 GPR162Q16538 588 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 ERC1Q8IUD2 1116 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 SMC5Q8IY18 1101 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 RHPN1Q8TCX5 695 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 GCC1Q96CN9 775 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 GGA1Q9UJY5 639 aa23.23■■□□□ 1.31
SMN2-202ENST00000380742 ATP2B4P23634 1241 aa23.22■■□□□ 1.31
SMN2-202ENST00000380742 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
SMN2-202ENST00000380742 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
SMN2-202ENST00000380742 LEMD3Q9Y2U8 911 aa23.22■■□□□ 1.31
SMN2-202ENST00000380742 NFKBIEO00221 500 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 UFL1O94874 794 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 FGFR2P21802 821 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 KIF1BPQ96EK5 621 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 GPR101Q96P66 508 aaPredicted RBP23.21■■□□□ 1.31
SMN2-202ENST00000380742 PSMD1Q99460 953 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 ZNF804BA4D1E1 1349 aa23.21■■□□□ 1.31
SMN2-202ENST00000380742 C6orf229H3BNL8 230 aa23.2■■□□□ 1.3
SMN2-202ENST00000380742 FKBP4Q02790 459 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMN2-202ENST00000380742 UBE4AQ14139 1066 aa23.2■■□□□ 1.3
SMN2-202ENST00000380742 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
SMN2-202ENST00000380742 ARHGAP27Q6ZUM4 889 aa23.2■■□□□ 1.3
SMN2-202ENST00000380742 IL1RAPL2Q9NP60 686 aa23.2■■□□□ 1.3
SMN2-202ENST00000380742 SMARCA5O60264 1052 aaPredicted RBP23.19■■□□□ 1.3
SMN2-202ENST00000380742 KCNJ4P48050 445 aa23.19■■□□□ 1.3
SMN2-202ENST00000380742 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
SMN2-202ENST00000380742 LRRCC1Q9C099 1032 aa23.19■■□□□ 1.3
SMN2-202ENST00000380742 KDM2BQ8NHM5 1336 aa23.19■■□□□ 1.3
SMN2-202ENST00000380742 ZNF609O15014 1411 aa23.19■■□□□ 1.3
SMN2-202ENST00000380742 DICER1Q9UPY3 1922 aaKnown RBP23.18■■□□□ 1.3
SMN2-202ENST00000380742 UTRNP46939 3433 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 KLRK1P26718 216 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 TIMM10P62072 90 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 RASSF7Q02833 373 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 ATP2B3Q16720 1220 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 TAOK3Q9H2K8 898 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 GPR108Q9NPR9 543 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 AKAP2Q9Y2D5 859 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 IRS2Q9Y4H2 1338 aa23.18■■□□□ 1.3
SMN2-202ENST00000380742 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
SMN2-202ENST00000380742 TXNRD3Q86VQ6 643 aa23.17■■□□□ 1.3
SMN2-202ENST00000380742 SUPT20HQ8NEM7 779 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms