RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SEC62Q99442 399 aaKnown RBP18.08■□□□□ 0.49
SNX2-201ENST00000379516 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.48
SNX2-201ENST00000379516 GSE1Q14687 1217 aa18.08■□□□□ 0.48
SNX2-201ENST00000379516 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
SNX2-201ENST00000379516 TTC14Q96N46 770 aa18.08■□□□□ 0.48
SNX2-201ENST00000379516 AFF2P51816 1311 aa18.08■□□□□ 0.48
SNX2-201ENST00000379516 SLC27A2O14975 620 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 CPA1P15085 419 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNX2-201ENST00000379516 CCDC129Q6ZRS4 1044 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 DDX11L8A8MPP1 907 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 NTSR2O95665 410 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 AK2P54819 239 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
SNX2-201ENST00000379516 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
SNX2-201ENST00000379516 CLEC4GQ6UXB4 293 aa18.06■□□□□ 0.48
SNX2-201ENST00000379516 ZSWIM6Q9HCJ5 1215 aa18.06■□□□□ 0.48
SNX2-201ENST00000379516 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
SNX2-201ENST00000379516 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
SNX2-201ENST00000379516 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
SNX2-201ENST00000379516 VGLL2Q8N8G2 317 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
SNX2-201ENST00000379516 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 MYH3P11055 1940 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 PDE8BO95263 885 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 PKP1Q13835 747 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 SLFNL1Q499Z3 407 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 TICAM2Q86XR7 235 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
SNX2-201ENST00000379516 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 CCDC152Q4G0S7 254 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 SEC31BQ9NQW1 1179 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 RNF113AO15541 343 aaKnown RBP18.04■□□□□ 0.48
SNX2-201ENST00000379516 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
SNX2-201ENST00000379516 PSMA5P28066 241 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 SCARF1Q14162 830 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 VPS53Q5VIR6 699 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 RUFY3Q7L099 469 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
SNX2-201ENST00000379516 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
SNX2-201ENST00000379516 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
SNX2-201ENST00000379516 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
SNX2-201ENST00000379516 ZMYM1Q5SVZ6 1142 aa18.03■□□□□ 0.48
SNX2-201ENST00000379516 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
SNX2-201ENST00000379516 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SNX2-201ENST00000379516 HMG20BQ9P0W2 317 aa18.03■□□□□ 0.48
SNX2-201ENST00000379516 TRPC5Q9UL62 973 aaPredicted RBP18.03■□□□□ 0.48
SNX2-201ENST00000379516 ZAP70P43403 619 aa18.02■□□□□ 0.48
SNX2-201ENST00000379516 HELBQ8NG08 1087 aaPredicted RBP18.02■□□□□ 0.48
SNX2-201ENST00000379516 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
SNX2-201ENST00000379516 LRRFIP1Q32MZ4 808 aaKnown RBP18.02■□□□□ 0.47
SNX2-201ENST00000379516 SEPT12Q8IYM1 358 aa18.02■□□□□ 0.47
SNX2-201ENST00000379516 GNPATO15228 680 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 TRAK2O60296 914 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 BICDL1Q6ZP65 573 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 TAF6LQ9Y6J9 622 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 RPAP1Q9BWH6 1393 aaPredicted RBP18.01■□□□□ 0.47
SNX2-201ENST00000379516 BTAF1O14981 1849 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
SNX2-201ENST00000379516 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
SNX2-201ENST00000379516 IGHMBP2P38935 993 aaKnown RBP18.01■□□□□ 0.47
SNX2-201ENST00000379516 PUM3Q15397 648 aaKnown RBP18.01■□□□□ 0.47
SNX2-201ENST00000379516 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 PI16Q6UXB8 463 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 CLEC17AQ6ZS10 378 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 LPIN2Q92539 896 aa18.01■□□□□ 0.47
SNX2-201ENST00000379516 NHSQ6T4R5 1651 aa18■□□□□ 0.47
SNX2-201ENST00000379516 ATRNO75882 1429 aa18■□□□□ 0.47
SNX2-201ENST00000379516 MCAMP43121 646 aa18■□□□□ 0.47
SNX2-201ENST00000379516 ERFEQ4G0M1 354 aa18■□□□□ 0.47
SNX2-201ENST00000379516 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
SNX2-201ENST00000379516 ZDHHC9Q9Y397 364 aa18■□□□□ 0.47
SNX2-201ENST00000379516 TBC1D9BQ66K14 1250 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 SPEF2Q9C093 1822 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 MAST3O60307 1309 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 LRP5O75197 1615 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 ZFYP08048 801 aaPredicted RBP17.99■□□□□ 0.47
SNX2-201ENST00000379516 KRT32Q14532 448 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 CCDC102BQ68D86 513 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 ZNF512BQ96KM6 892 aaPredicted RBP17.99■□□□□ 0.47
SNX2-201ENST00000379516 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
SNX2-201ENST00000379516 RTCBQ9Y3I0 505 aaKnown RBP17.99■□□□□ 0.47
SNX2-201ENST00000379516 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
SNX2-201ENST00000379516 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 ZPR1O75312 459 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 FGFR2P21802 821 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 GTF2E1P29083 439 aaPredicted RBP17.98■□□□□ 0.47
SNX2-201ENST00000379516 COL9A3Q14050 684 aaPredicted RBP17.98■□□□□ 0.47
SNX2-201ENST00000379516 OSBP2Q969R2 916 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
SNX2-201ENST00000379516 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms