RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CIZ1Q9ULV3 898 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-202ENST00000379446 MLH3Q9UHC1 1453 aa7.7□□□□□ -1.18
NEDD9-202ENST00000379446 UBXN2AP68543 259 aa7.7□□□□□ -1.18
NEDD9-202ENST00000379446 CCNA1P78396 465 aa7.7□□□□□ -1.18
NEDD9-202ENST00000379446 TPD52L1Q16890 204 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-202ENST00000379446 PIGBQ92521 554 aa7.7□□□□□ -1.18
NEDD9-202ENST00000379446 TEKT1Q969V4 418 aa7.7□□□□□ -1.18
NEDD9-202ENST00000379446 ABCC11Q96J66 1382 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 TAF5LO75529 589 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 MAP1SQ66K74 1059 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-202ENST00000379446 SYT17Q9BSW7 474 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 FBXO3Q9UK99 471 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 DDX49Q9Y6V7 483 aaKnown RBP7.69□□□□□ -1.18
NEDD9-202ENST00000379446 SSFA2P28290 1259 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 PDE4BQ07343 736 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 IQCA1Q86XH1 822 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 HOMER1Q86YM7 354 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 BOLA2Q9H3K6 86 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 MYO5CQ9NQX4 1742 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 PTPRTO14522 1441 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 BMS1Q14692 1282 aaKnown RBP7.69□□□□□ -1.18
NEDD9-202ENST00000379446 NSMFQ6X4W1 530 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 TTC6Q86TZ1 520 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 NR2E3Q9Y5X4 410 aa7.69□□□□□ -1.18
NEDD9-202ENST00000379446 CHD1LQ86WJ1 897 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 UIMC1Q96RL1 719 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 HOMER2Q9NSB8 354 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 MCM9Q9NXL9 1143 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 SPATA31A1Q5TZJ5 1347 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 DDX11L8A8MPP1 907 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 TRPA1O75762 1119 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 USP17L8P0C7I0 530 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 CLCN1P35523 988 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 DEFB115Q30KQ5 88 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 NCAPG2Q86XI2 1143 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 SAP30BPQ9UHR5 308 aaKnown RBP7.68□□□□□ -1.18
NEDD9-202ENST00000379446 IQGAP3Q86VI3 1631 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 USP6P35125 1406 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 PDE8AO60658 829 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 MICAL1Q8TDZ2 1067 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 UNC13BO14795 1591 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 OVOS2A0A0G2JMS6 1433 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 OVOS2A0A0J9YW53 1432 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 OVOS2Q6IE36 1432 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-202ENST00000379446 BBOX1O75936 387 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 TSPY3P0CV98 308 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 TSPY8P0CW00 308 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 ATP2B4P23634 1241 aa7.68□□□□□ -1.18
NEDD9-202ENST00000379446 ERBB3P21860 1342 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 TFRCP02786 760 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 ADRA2BP18089 450 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 ZFYVE27Q5T4F4 411 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 USP19O94966 1318 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 IGSF3O75054 1194 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 TRIM21P19474 475 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 ITGA6P23229 1130 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 NOP2P46087 812 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 TRIM22Q8IYM9 498 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 MARCH10Q8NA82 808 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 RNF214Q8ND24 703 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 MTIF3Q9H2K0 278 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 ARHGEF10LQ9HCE6 1279 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 USP40Q9NVE5 1235 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 SYNMO15061 1565 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 TNPO2O14787 897 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 AOC3Q16853 763 aa7.67□□□□□ -1.18
NEDD9-202ENST00000379446 RIMS1Q86UR5 1692 aaKnown RBP7.67□□□□□ -1.18
NEDD9-202ENST00000379446 SPATA31A5Q5VU36 1347 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 SPATA31A7Q8IWB4 1347 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 OSBPP22059 807 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CTCFLQ8NI51 663 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 PDCL3Q9H2J4 239 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 KCNH4Q9UQ05 1017 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CNPY2Q9Y2B0 182 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 EXOC6BQ9Y2D4 811 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 E9PCH4 1651 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 ANKRD36BQ8N2N9 1353 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 TPM2P07951 284 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 NASPP49321 788 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 MIGA1Q8NAN2 632 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 RNF169Q8NCN4 708 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 BBXQ8WY36 941 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 A0A1W2PP64 1363 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 NOP56O00567 594 aaKnown RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CT47B1P0C2W7 299 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 TBC1D22AQ8WUA7 517 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 FTOQ9C0B1 505 aaKnown RBP eCLIP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 TSKSQ9UJT2 592 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CLTCL1P53675 1640 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 UQCRHLA0A096LP55 91 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 GOLIM4O00461 696 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 UQCRHP07919 91 aa7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CWF19L2Q2TBE0 894 aaKnown RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
NEDD9-202ENST00000379446 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms