RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 CCDC121Q6ZUS5 278 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
RAD50-201ENST00000378823 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 PSMC4P43686 418 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 NUCB1Q02818 461 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
RAD50-201ENST00000378823 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 NSD2O96028 1365 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 CCDC63Q8NA47 563 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 RTN1Q16799 776 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 NAP1L3Q99457 506 aaPredicted RBP12.73□□□□□ -0.37
RAD50-201ENST00000378823 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 CNPY2Q9Y2B0 182 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
RAD50-201ENST00000378823 PHACTR2O75167 634 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 ZNF830Q96NB3 372 aaPredicted RBP12.72□□□□□ -0.37
RAD50-201ENST00000378823 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
RAD50-201ENST00000378823 GSTO1P78417 241 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 IMPG2Q9BZV3 1241 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAD50-201ENST00000378823 TRAF1Q13077 416 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
RAD50-201ENST00000378823 GPTP24298 496 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 CFAP58Q5T655 872 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 CPLX4Q7Z7G2 160 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 ZGPATQ8N5A5 531 aaKnown RBP12.72□□□□□ -0.37
RAD50-201ENST00000378823 ESR2Q92731 530 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
RAD50-201ENST00000378823 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 RALGAPBQ86X10 1494 aa12.72□□□□□ -0.37
RAD50-201ENST00000378823 NESP48681 1621 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 EIF2AK4Q9P2K8 1649 aaKnown RBP12.71□□□□□ -0.37
RAD50-201ENST00000378823 CCDC14Q49A88 953 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 WAPLQ7Z5K2 1190 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ANAPC4Q9UJX5 808 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ARHGEF11O15085 1522 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 STIM2Q9P246 746 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 BICDL2A1A5D9 508 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 TUBBP07437 444 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ARID5AQ03989 594 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ZEB2O60315 1214 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 CLCN1P35523 988 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 ZNF354CQ86Y25 554 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 AOPEPQ8N6M6 819 aa12.71□□□□□ -0.37
RAD50-201ENST00000378823 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.37
RAD50-201ENST00000378823 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 VAV2P52735 878 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 NAIPQ13075 1403 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 MYO10Q9HD67 2058 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.38
RAD50-201ENST00000378823 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.38
RAD50-201ENST00000378823 SKAP1Q86WV1 359 aa12.71□□□□□ -0.38
RAD50-201ENST00000378823 GNAQP50148 359 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 SMC1BQ8NDV3 1235 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
RAD50-201ENST00000378823 SDSP20132 328 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 CCDC42Q96M95 316 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 FMNL3Q8IVF7 1028 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 CCDC50Q8IVM0 306 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 VPS18Q9P253 973 aa12.7□□□□□ -0.38
RAD50-201ENST00000378823 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
RAD50-201ENST00000378823 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
RAD50-201ENST00000378823 UBXN1Q04323 297 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 CALML3P27482 149 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
RAD50-201ENST00000378823 NEK11Q8NG66 645 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 NDC80O14777 642 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 SELENOSQ9BQE4 189 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 TRIM7Q9C029 511 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
RAD50-201ENST00000378823 ASIC1P78348 528 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 TYRO3Q06418 890 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 IL16Q14005 1332 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 SEPT6Q14141 434 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
RAD50-201ENST00000378823 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms