RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 ALS2Q96Q42 1657 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 SMTNL1A8MU46 457 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
FXN-201ENST00000377270 MAP2K2P36507 400 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 MTX1Q13505 466 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 PHKG2P15735 406 aa18.18■□□□□ 0.5
FXN-201ENST00000377270 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
FXN-201ENST00000377270 KDM4AO75164 1064 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 TPM3P06753 285 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 HMGB1P09429 215 aaKnown RBP18.17■□□□□ 0.5
FXN-201ENST00000377270 PDIA6Q15084 440 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 ZSCAN26Q16670 478 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 GTF3C6Q969F1 213 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 IL25Q9H293 177 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 MAP9Q49MG5 647 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 SWT1Q5T5J6 900 aaKnown RBP18.17■□□□□ 0.5
FXN-201ENST00000377270 JMYQ8N9B5 988 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 ANKRD20A12PQ8NF67 263 aa18.17■□□□□ 0.5
FXN-201ENST00000377270 CWC15Q9P013 229 aaKnown RBP18.16■□□□□ 0.5
FXN-201ENST00000377270 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
FXN-201ENST00000377270 GADD45BO75293 160 aaPredicted RBP18.16■□□□□ 0.5
FXN-201ENST00000377270 MYL6BP14649 208 aa18.16■□□□□ 0.5
FXN-201ENST00000377270 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
FXN-201ENST00000377270 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
FXN-201ENST00000377270 SIPA1L3O60292 1781 aaPredicted RBP18.15■□□□□ 0.5
FXN-201ENST00000377270 KLHL33A6NCF5 533 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 GRM8O00222 908 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
FXN-201ENST00000377270 CADPS2Q86UW7 1296 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
FXN-201ENST00000377270 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
FXN-201ENST00000377270 CALRP27797 417 aaKnown RBP18.15■□□□□ 0.5
FXN-201ENST00000377270 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 FBXO38Q6PIJ6 1188 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 ITFG2Q969R8 447 aa18.15■□□□□ 0.5
FXN-201ENST00000377270 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.49
FXN-201ENST00000377270 C11orf91Q3C1V1 193 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 TEX35Q5T0J7 233 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 CCDC183Q5T5S1 534 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 SUCLG2Q96I99 432 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
FXN-201ENST00000377270 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 MCM2P49736 904 aa18.14■□□□□ 0.49
FXN-201ENST00000377270 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 MEGF6O75095 1541 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 LMTK3Q96Q04 1460 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
FXN-201ENST00000377270 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
FXN-201ENST00000377270 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
FXN-201ENST00000377270 GLRX3O76003 335 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 LARP1Q6PKG0 1096 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 BICC1Q9H694 974 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 DCCP43146 1447 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 SGSM2O43147 1006 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 CUL4AQ13619 759 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 ERC1Q8IUD2 1116 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 GDPD2Q9HCC8 539 aa18.12■□□□□ 0.49
FXN-201ENST00000377270 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
FXN-201ENST00000377270 KIF3CO14782 793 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 CYP27B1O15528 508 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
FXN-201ENST00000377270 HSPA4P34932 840 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 MAGEA9P43362 315 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 ZC3H12AQ5D1E8 599 aaKnown RBP18.11■□□□□ 0.49
FXN-201ENST00000377270 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 EPB41L2O43491 1005 aaKnown RBP18.11■□□□□ 0.49
FXN-201ENST00000377270 NEXNQ0ZGT2 675 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
FXN-201ENST00000377270 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
FXN-201ENST00000377270 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 UTYO14607 1347 aa18.11■□□□□ 0.49
FXN-201ENST00000377270 TNS3Q68CZ2 1445 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 H0YHG0 523 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 SARNPP82979 210 aaKnown RBP18.1■□□□□ 0.49
FXN-201ENST00000377270 ECHDC1Q9NTX5 307 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 HSPA2P54652 639 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 TRDNQ13061 729 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 SMARCE1Q969G3 411 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.1■□□□□ 0.49
FXN-201ENST00000377270 V9GYY5 206 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms