RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
PRDM2-204ENST00000376048 USP27XA6NNY8 438 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 ZNF165P49910 485 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 ZNF75DP51815 510 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 HSP90AB4PQ58FF6 505 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 BLOC1S2Q6QNY1 142 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
PRDM2-204ENST00000376048 SLC52A2Q9HAB3 445 aa14.09□□□□□ -0.15
PRDM2-204ENST00000376048 LRRC2Q9BYS8 371 aa14.08□□□□□ -0.15
PRDM2-204ENST00000376048 GRM8O00222 908 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 TPM3P06753 285 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 PLA2G4DQ86XP0 818 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
PRDM2-204ENST00000376048 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRDM2-204ENST00000376048 V9GYY5 206 aaPredicted RBP14.08□□□□□ -0.16
PRDM2-204ENST00000376048 ELP1O95163 1332 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 PDE4CQ08493 712 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 FSD1Q9BTV5 496 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.16
PRDM2-204ENST00000376048 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
PRDM2-204ENST00000376048 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
PRDM2-204ENST00000376048 HOXB7P09629 217 aa14.07□□□□□ -0.16
PRDM2-204ENST00000376048 RPS6KB1P23443 525 aa14.07□□□□□ -0.16
PRDM2-204ENST00000376048 CLSTN2Q9H4D0 955 aa14.07□□□□□ -0.16
PRDM2-204ENST00000376048 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRDM2-204ENST00000376048 ZNF330Q9Y3S2 320 aaPredicted RBP14.07□□□□□ -0.16
PRDM2-204ENST00000376048 TPD52L1Q16890 204 aaPredicted RBP14.06□□□□□ -0.16
PRDM2-204ENST00000376048 SLFNL1Q499Z3 407 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
PRDM2-204ENST00000376048 SCAND2PQ9GZW5 306 aaPredicted RBP14.06□□□□□ -0.16
PRDM2-204ENST00000376048 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 GOLGB1Q14789 3259 aaKnown RBP14.06□□□□□ -0.16
PRDM2-204ENST00000376048 MTX1Q13505 466 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 CCDC129Q6ZRS4 1044 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 UBE3BQ7Z3V4 1068 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 BRF1Q92994 677 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
PRDM2-204ENST00000376048 MST1RQ04912 1400 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 USP54Q70EL1 1684 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 TDRD7Q8NHU6 1098 aaKnown RBP14.05□□□□□ -0.16
PRDM2-204ENST00000376048 SLIT3O75094 1523 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 HEG1Q9ULI3 1381 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 PDCP20941 246 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 PSMA5P28066 241 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
PRDM2-204ENST00000376048 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 SEC62Q99442 399 aaKnown RBP14.05□□□□□ -0.16
PRDM2-204ENST00000376048 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
PRDM2-204ENST00000376048 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 CTNNA3Q9UI47 895 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 COL15A1P39059 1388 aa14.05□□□□□ -0.16
PRDM2-204ENST00000376048 NEURL1BA8MQ27 555 aa14.04□□□□□ -0.16
PRDM2-204ENST00000376048 DDX19AQ9NUU7 478 aaKnown RBP14.04□□□□□ -0.16
PRDM2-204ENST00000376048 TRMT1Q9NXH9 659 aaKnown RBP14.04□□□□□ -0.16
PRDM2-204ENST00000376048 SMTNL1A8MU46 457 aa14.04□□□□□ -0.16
PRDM2-204ENST00000376048 TTC5Q8N0Z6 440 aa14.04□□□□□ -0.16
PRDM2-204ENST00000376048 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRDM2-204ENST00000376048 FILIP1Q7Z7B0 1213 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 CABP4P57796 275 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 GCKRQ14397 625 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 IFNL2Q8IZJ0 200 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
PRDM2-204ENST00000376048 CCDC85AQ96PX6 553 aaPredicted RBP14.03□□□□□ -0.16
PRDM2-204ENST00000376048 LMO7Q8WWI1 1683 aa14.03□□□□□ -0.16
PRDM2-204ENST00000376048 TAF5LO75529 589 aa14.02□□□□□ -0.16
PRDM2-204ENST00000376048 A1BGP04217 495 aa14.02□□□□□ -0.16
PRDM2-204ENST00000376048 RESTQ13127 1097 aa14.02□□□□□ -0.16
PRDM2-204ENST00000376048 IQCB1Q15051 598 aa14.02□□□□□ -0.16
PRDM2-204ENST00000376048 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.16
PRDM2-204ENST00000376048 TRPM3Q9HCF6 1732 aaPredicted RBP14.02□□□□□ -0.16
PRDM2-204ENST00000376048 NPHP1O15259 732 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
PRDM2-204ENST00000376048 RNF20Q5VTR2 975 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 Q6ZUG5 572 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 LRRC8AQ8IWT6 810 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 GOLPH3LQ9H4A5 285 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 PRDM11Q9NQV5 511 aa14.02□□□□□ -0.17
PRDM2-204ENST00000376048 MED23Q9ULK4 1368 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 H3BQV1 296 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 IFFO2Q5TF58 517 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 LRP10Q7Z4F1 713 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 GTF3C6Q969F1 213 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
PRDM2-204ENST00000376048 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
PRDM2-204ENST00000376048 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 ZBTB3Q9H5J0 574 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
PRDM2-204ENST00000376048 NBPF26B4DH59 902 aa14□□□□□ -0.17
PRDM2-204ENST00000376048 GUCY1B3Q02153 619 aa14□□□□□ -0.17
PRDM2-204ENST00000376048 SCRN1Q12765 414 aa14□□□□□ -0.17
PRDM2-204ENST00000376048 ANKRD1Q15327 319 aa14□□□□□ -0.17
PRDM2-204ENST00000376048 NBPF14Q5TI25 921 aa14□□□□□ -0.17
PRDM2-204ENST00000376048 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
PRDM2-204ENST00000376048 NBPF15Q8N660 670 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms