RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
CXCL12-203ENST00000374429 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
CXCL12-203ENST00000374429 SLC9C2Q5TAH2 1124 aa12.81□□□□□ -0.36
CXCL12-203ENST00000374429 NFXL1Q6ZNB6 911 aa12.81□□□□□ -0.36
CXCL12-203ENST00000374429 CYP21A2P08686 494 aa12.81□□□□□ -0.36
CXCL12-203ENST00000374429 MCM2P49736 904 aa12.81□□□□□ -0.36
CXCL12-203ENST00000374429 ATG3Q9NT62 314 aa12.81□□□□□ -0.36
CXCL12-203ENST00000374429 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
CXCL12-203ENST00000374429 EYA2O00167 538 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 CPLX1O14810 134 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 ZSCAN22P10073 491 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-203ENST00000374429 PSMA5P28066 241 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 CMTR1Q8N1G2 835 aaKnown RBP12.8□□□□□ -0.36
CXCL12-203ENST00000374429 C17orf53Q8N3J3 647 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-203ENST00000374429 PRDM4Q9UKN5 801 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-203ENST00000374429 MCMDC2Q4G0Z9 681 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 MINDY4BA8MYZ0 360 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
CXCL12-203ENST00000374429 DDIT3P35638 169 aa12.79□□□□□ -0.36
CXCL12-203ENST00000374429 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
CXCL12-203ENST00000374429 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
CXCL12-203ENST00000374429 ESPNB1AK53 854 aa12.79□□□□□ -0.36
CXCL12-203ENST00000374429 SF3A1Q15459 793 aaKnown RBP12.79□□□□□ -0.36
CXCL12-203ENST00000374429 BRD1O95696 1058 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 FOXO4P98177 505 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 hCG_1642624A0A1W2PR95 340 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 F13A1P00488 732 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 OSBP2Q969R2 916 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 SPATA32Q96LK8 384 aa12.78□□□□□ -0.36
CXCL12-203ENST00000374429 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
CXCL12-203ENST00000374429 ERBB4Q15303 1308 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 PHKA1P46020 1223 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 ANAPC15P60006 121 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 CARD10Q9BWT7 1032 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.36
CXCL12-203ENST00000374429 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.36
CXCL12-203ENST00000374429 M0R2C6 588 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-203ENST00000374429 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 TSPY26PQ9H489 355 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 MST1RQ04912 1400 aa12.77□□□□□ -0.37
CXCL12-203ENST00000374429 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 PRDM1O75626 825 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 ADRA2BP18089 450 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 HIP1O00291 1037 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 BIN1O00499 593 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 ME1P48163 572 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 BCAMP50895 628 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
CXCL12-203ENST00000374429 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
CXCL12-203ENST00000374429 RPS6KB1P23443 525 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 RFX5P48382 616 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 KBTBD3Q8NAB2 608 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 CCDC191Q8NCU4 936 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 SYAP1Q96A49 352 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 VGLL3A8MV65 326 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 ATP5JP18859 108 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 TRDNQ13061 729 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 DACT1Q9NYF0 836 aa12.75□□□□□ -0.37
CXCL12-203ENST00000374429 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-203ENST00000374429 NALCNQ8IZF0 1738 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 ERVV-2B6SEH9 535 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
CXCL12-203ENST00000374429 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 MTX1Q13505 466 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 AIFM3Q96NN9 605 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 KLF18A0A0U1RQI7 1052 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 H7C1W4 665 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 LIG1P18858 919 aa12.74□□□□□ -0.37
CXCL12-203ENST00000374429 MAGEB6Q8N7X4 407 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms