RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PTPRMP28827 1452 aa14.09□□□□□ -0.15
NCDN-202ENST00000373243 PROSER2Q86WR7 435 aaPredicted RBP14.09□□□□□ -0.15
NCDN-202ENST00000373243 AOPEPQ8N6M6 819 aa14.09□□□□□ -0.15
NCDN-202ENST00000373243 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
NCDN-202ENST00000373243 LEO1Q8WVC0 666 aaPredicted RBP14.09□□□□□ -0.15
NCDN-202ENST00000373243 DBNDD2Q9BQY9 259 aa14.09□□□□□ -0.15
NCDN-202ENST00000373243 TTC39AQ5SRH9 613 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
NCDN-202ENST00000373243 NRXN1Q9ULB1 1477 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 CEP135Q66GS9 1140 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 TMC6Q7Z403 805 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 KIF18AQ8NI77 898 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 CEP126Q9P2H0 1117 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 ATP7BP35670 1465 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 TULP1O00294 542 aaPredicted RBP14.08□□□□□ -0.16
NCDN-202ENST00000373243 KCNH5Q8NCM2 988 aa14.08□□□□□ -0.16
NCDN-202ENST00000373243 MYCBPQ99417 103 aaPredicted RBP14.08□□□□□ -0.16
NCDN-202ENST00000373243 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
NCDN-202ENST00000373243 BCCIPQ9P287 314 aaKnown RBP eCLIP14.08□□□□□ -0.16
NCDN-202ENST00000373243 ALDH1L1O75891 902 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 RPS6KB1P23443 525 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 GOLGA6L1Q8N7Z2 621 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 C8orf76Q96K31 380 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 ANO10Q9NW15 660 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
NCDN-202ENST00000373243 CFAP100Q494V2 611 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 AKAP4Q5JQC9 854 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 EFCC1Q9HA90 598 aa14.07□□□□□ -0.16
NCDN-202ENST00000373243 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
NCDN-202ENST00000373243 A0A1B0GVL5 298 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 TEX35Q5T0J7 233 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 GEMIN8Q9NWZ8 242 aaKnown RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 NEXMIFQ5QGS0 1516 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 TRIM66O15016 1216 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 MARCKSP29966 332 aaPredicted RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 ZNF589Q86UQ0 364 aaPredicted RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 RNMTO43148 476 aaKnown RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
NCDN-202ENST00000373243 CCDC158Q5M9N0 1113 aa14.06□□□□□ -0.16
NCDN-202ENST00000373243 AXDND1Q5T1B0 1012 aaPredicted RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
NCDN-202ENST00000373243 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
NCDN-202ENST00000373243 SHPRHQ149N8 1683 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 GOLGA8BA8MQT2 603 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
NCDN-202ENST00000373243 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 SLFNL1Q499Z3 407 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 IGSF1Q8N6C5 1336 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 RXRAP19793 462 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 STX1AQ16623 288 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
NCDN-202ENST00000373243 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 CHGBP05060 677 aa14.05□□□□□ -0.16
NCDN-202ENST00000373243 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.16
NCDN-202ENST00000373243 AOX1Q06278 1338 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 CCDC69A6NI79 296 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 DHX16O60231 1041 aaKnown RBP14.04□□□□□ -0.16
NCDN-202ENST00000373243 GCP02774 474 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
NCDN-202ENST00000373243 MCMDC2Q4G0Z9 681 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 OLFM4Q6UX06 510 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
NCDN-202ENST00000373243 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 TULP2O00295 520 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 URI1O94763 535 aaPredicted RBP14.04□□□□□ -0.16
NCDN-202ENST00000373243 LRRFIP1Q32MZ4 808 aaKnown RBP14.04□□□□□ -0.16
NCDN-202ENST00000373243 CCDC191Q8NCU4 936 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 IP6K1Q92551 441 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 KIAA1210Q9ULL0 1709 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 ARHGEF10O15013 1369 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 CPS1P31327 1500 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 HMG20BQ9P0W2 317 aa14.04□□□□□ -0.16
NCDN-202ENST00000373243 CPSF1Q10570 1443 aaKnown RBP14.03□□□□□ -0.16
NCDN-202ENST00000373243 ZNF75DP51815 510 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 EVA1CP58658 441 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 MTMR7Q9Y216 660 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 SLC3A2P08195 630 aaKnown RBP14.03□□□□□ -0.16
NCDN-202ENST00000373243 SYT10Q6XYQ8 523 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 ZNF594Q96JF6 807 aaPredicted RBP14.03□□□□□ -0.16
NCDN-202ENST00000373243 CNNM1Q9NRU3 951 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 MRVI1Q9Y6F6 885 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
NCDN-202ENST00000373243 TAF6LQ9Y6J9 622 aa14.03□□□□□ -0.16
NCDN-202ENST00000373243 MORC2Q9Y6X9 1032 aaPredicted RBP14.03□□□□□ -0.16
NCDN-202ENST00000373243 KLF18A0A0U1RQI7 1052 aa14.02□□□□□ -0.16
NCDN-202ENST00000373243 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms