RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
PABPC4-201ENST00000372856 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
PABPC4-201ENST00000372856 DDX19AQ9NUU7 478 aaKnown RBP18.63■□□□□ 0.57
PABPC4-201ENST00000372856 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
PABPC4-201ENST00000372856 DBNLQ9UJU6 430 aaKnown RBP18.63■□□□□ 0.57
PABPC4-201ENST00000372856 DDX41Q9UJV9 622 aaKnown RBP18.63■□□□□ 0.57
PABPC4-201ENST00000372856 COL15A1P39059 1388 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 GCKRQ14397 625 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 DNAJC25Q9H1X3 360 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 CLSTN2Q9H4D0 955 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 CALCOCO1Q9P1Z2 691 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 Q6ZUG5 572 aa18.62■□□□□ 0.57
PABPC4-201ENST00000372856 H3BQV1 296 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 CTIFO43310 598 aaKnown RBP18.61■□□□□ 0.57
PABPC4-201ENST00000372856 TFCP2Q12800 502 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 ZNF165P49910 485 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 SLC20A2Q08357 652 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 C16orf45Q96MC5 204 aaPredicted RBP18.61■□□□□ 0.57
PABPC4-201ENST00000372856 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
PABPC4-201ENST00000372856 ALDH8A1Q9H2A2 487 aaPredicted RBP18.61■□□□□ 0.57
PABPC4-201ENST00000372856 TMX1Q9H3N1 280 aa18.6■□□□□ 0.57
PABPC4-201ENST00000372856 RESTQ13127 1097 aa18.6■□□□□ 0.57
PABPC4-201ENST00000372856 TSGA10IPQ3SY00 556 aa18.6■□□□□ 0.57
PABPC4-201ENST00000372856 ZNF790Q6PG37 636 aa18.6■□□□□ 0.57
PABPC4-201ENST00000372856 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.6■□□□□ 0.57
PABPC4-201ENST00000372856 V9GYY5 206 aaPredicted RBP18.6■□□□□ 0.57
PABPC4-201ENST00000372856 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
PABPC4-201ENST00000372856 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 ZNF75DP51815 510 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 CYP21A2P08686 494 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 TNNI3KQ59H18 835 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 DDX46Q7L014 1031 aaKnown RBP18.59■□□□□ 0.57
PABPC4-201ENST00000372856 FPGT-TNNI3KV9GXZ4 949 aa18.59■□□□□ 0.57
PABPC4-201ENST00000372856 NCAPD2Q15021 1401 aa18.58■□□□□ 0.57
PABPC4-201ENST00000372856 ATP5JP18859 108 aa18.58■□□□□ 0.57
PABPC4-201ENST00000372856 KRT32Q14532 448 aa18.58■□□□□ 0.57
PABPC4-201ENST00000372856 KRT222Q8N1A0 295 aa18.58■□□□□ 0.57
PABPC4-201ENST00000372856 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.57
PABPC4-201ENST00000372856 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
PABPC4-201ENST00000372856 DHX37Q8IY37 1157 aaKnown RBP18.58■□□□□ 0.56
PABPC4-201ENST00000372856 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.56
PABPC4-201ENST00000372856 KIF18AQ8NI77 898 aa18.58■□□□□ 0.56
PABPC4-201ENST00000372856 PTPN12Q05209 780 aaKnown RBP18.58■□□□□ 0.56
PABPC4-201ENST00000372856 SLFNL1Q499Z3 407 aa18.58■□□□□ 0.56
PABPC4-201ENST00000372856 UBE3BQ7Z3V4 1068 aa18.58■□□□□ 0.56
PABPC4-201ENST00000372856 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.56
PABPC4-201ENST00000372856 FTOQ9C0B1 505 aaKnown RBP eCLIP18.58■□□□□ 0.56
PABPC4-201ENST00000372856 ZNF592Q92610 1267 aa18.57■□□□□ 0.56
PABPC4-201ENST00000372856 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
PABPC4-201ENST00000372856 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
PABPC4-201ENST00000372856 SCRN1Q12765 414 aa18.57■□□□□ 0.56
PABPC4-201ENST00000372856 PLA2G4DQ86XP0 818 aa18.57■□□□□ 0.56
PABPC4-201ENST00000372856 TDRD7Q8NHU6 1098 aaKnown RBP18.57■□□□□ 0.56
PABPC4-201ENST00000372856 JCADQ9P266 1359 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 TULP2O00295 520 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 ZSCAN25Q6NSZ9 544 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 ZNF609O15014 1411 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-201ENST00000372856 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
PABPC4-201ENST00000372856 MORC2Q9Y6X9 1032 aaPredicted RBP18.56■□□□□ 0.56
PABPC4-201ENST00000372856 A0A087WWV3 80 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 FEZ2Q9UHY8 353 aaPredicted RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 NPHP1O15259 732 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 HNRNPH2P55795 449 aaKnown RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 CCDC144BQ3MJ40 725 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 MCMDC2Q4G0Z9 681 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
PABPC4-201ENST00000372856 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
PABPC4-201ENST00000372856 CCT2P78371 535 aaKnown RBP18.54■□□□□ 0.56
PABPC4-201ENST00000372856 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
PABPC4-201ENST00000372856 CFAP45Q9UL16 551 aa18.54■□□□□ 0.56
PABPC4-201ENST00000372856 C11orf57Q6ZUT1 292 aaPredicted RBP18.53■□□□□ 0.56
PABPC4-201ENST00000372856 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
PABPC4-201ENST00000372856 APOBRQ0VD83 1088 aa18.53■□□□□ 0.56
PABPC4-201ENST00000372856 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
PABPC4-201ENST00000372856 ZSCAN16Q9H4T2 348 aaPredicted RBP18.53■□□□□ 0.56
PABPC4-201ENST00000372856 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
PABPC4-201ENST00000372856 OVOS2A0A0G2JMS6 1433 aa18.53■□□□□ 0.56
PABPC4-201ENST00000372856 A0A087WZG4 1122 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 TNNT1P13805 278 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 GUCY1B3Q02153 619 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
PABPC4-201ENST00000372856 GOLGA6L19H0YKK7 550 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 CHRM1P11229 460 aaPredicted RBP18.52■□□□□ 0.56
PABPC4-201ENST00000372856 ARID5BQ14865 1188 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 NEUROD6Q96NK8 337 aa18.52■□□□□ 0.56
PABPC4-201ENST00000372856 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms