RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TMX3Q96JJ7 454 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 RGL2O15211 777 aa30.05■■■□□ 2.4
CTSA-203ENST00000372459 ATP2B3Q16720 1220 aa30.05■■■□□ 2.4
CTSA-203ENST00000372459 TTC39AQ5SRH9 613 aa30.05■■■□□ 2.4
CTSA-203ENST00000372459 ZKSCAN1P17029 563 aaPredicted RBP30.04■■■□□ 2.4
CTSA-203ENST00000372459 ZNF589Q86UQ0 364 aaPredicted RBP30.04■■■□□ 2.4
CTSA-203ENST00000372459 ADORA1P30542 326 aa30.03■■■□□ 2.4
CTSA-203ENST00000372459 LRP5O75197 1615 aa30.03■■■□□ 2.4
CTSA-203ENST00000372459 ABCC12Q96J65 1359 aa30.03■■■□□ 2.4
CTSA-203ENST00000372459 LAMB2P55268 1798 aa30.03■■■□□ 2.4
CTSA-203ENST00000372459 MCMDC2Q4G0Z9 681 aa30.03■■■□□ 2.4
CTSA-203ENST00000372459 CCNL1Q9UK58 526 aaPredicted RBP30.03■■■□□ 2.4
CTSA-203ENST00000372459 DDX60Q8IY21 1712 aaKnown RBP30.02■■■□□ 2.4
CTSA-203ENST00000372459 MCM4P33991 863 aa30.02■■■□□ 2.4
CTSA-203ENST00000372459 CCDC152Q4G0S7 254 aa30.02■■■□□ 2.4
CTSA-203ENST00000372459 CREB3L3Q68CJ9 461 aa30.02■■■□□ 2.4
CTSA-203ENST00000372459 SEPT12Q8IYM1 358 aa30.02■■■□□ 2.4
CTSA-203ENST00000372459 VGLL2Q8N8G2 317 aa30.02■■■□□ 2.4
CTSA-203ENST00000372459 RNF20Q5VTR2 975 aa30.01■■■□□ 2.4
CTSA-203ENST00000372459 TM6SF1Q9BZW5 370 aa30.01■■■□□ 2.4
CTSA-203ENST00000372459 TAF5LO75529 589 aa30.01■■■□□ 2.39
CTSA-203ENST00000372459 RPS6KA4O75676 772 aa30.01■■■□□ 2.39
CTSA-203ENST00000372459 PDE8BO95263 885 aa30.01■■■□□ 2.39
CTSA-203ENST00000372459 TNPO1Q92973 898 aaKnown RBP30.01■■■□□ 2.39
CTSA-203ENST00000372459 MROH5Q6ZUA9 1318 aa30■■■□□ 2.39
CTSA-203ENST00000372459 CUL4AQ13619 759 aa30■■■□□ 2.39
CTSA-203ENST00000372459 SBF2Q86WG5 1849 aa30■■■□□ 2.39
CTSA-203ENST00000372459 CASTP20810 708 aaKnown RBP29.99■■■□□ 2.39
CTSA-203ENST00000372459 TTC14Q96N46 770 aa29.99■■■□□ 2.39
CTSA-203ENST00000372459 HELLSQ9NRZ9 838 aa29.99■■■□□ 2.39
CTSA-203ENST00000372459 RTL9Q8NET4 1388 aa29.99■■■□□ 2.39
CTSA-203ENST00000372459 SCN7AQ01118 1682 aa29.99■■■□□ 2.39
CTSA-203ENST00000372459 NUCB2P80303 420 aa29.99■■■□□ 2.39
CTSA-203ENST00000372459 SLC27A2O14975 620 aa29.98■■■□□ 2.39
CTSA-203ENST00000372459 ZGPATQ8N5A5 531 aaKnown RBP29.98■■■□□ 2.39
CTSA-203ENST00000372459 JAKMIP1Q96N16 626 aaKnown RBP29.98■■■□□ 2.39
CTSA-203ENST00000372459 LY75O60449 1722 aa29.98■■■□□ 2.39
CTSA-203ENST00000372459 FKBP4Q02790 459 aaKnown RBP eCLIP29.97■■■□□ 2.39
CTSA-203ENST00000372459 LRRFIP1Q32MZ4 808 aaKnown RBP29.97■■■□□ 2.39
CTSA-203ENST00000372459 NOL8Q76FK4 1167 aaKnown RBP29.97■■■□□ 2.39
CTSA-203ENST00000372459 HMG20BQ9P0W2 317 aa29.97■■■□□ 2.39
CTSA-203ENST00000372459 INTS4Q96HW7 963 aaKnown RBP29.97■■■□□ 2.39
CTSA-203ENST00000372459 MPHOSPH8Q99549 860 aa29.97■■■□□ 2.39
CTSA-203ENST00000372459 ZSWIM6Q9HCJ5 1215 aa29.97■■■□□ 2.39
CTSA-203ENST00000372459 NARFQ9UHQ1 456 aa29.97■■■□□ 2.39
CTSA-203ENST00000372459 GBP4Q96PP9 640 aa29.96■■■□□ 2.39
CTSA-203ENST00000372459 GNPATO15228 680 aa29.95■■■□□ 2.39
CTSA-203ENST00000372459 CHGBP05060 677 aa29.95■■■□□ 2.39
CTSA-203ENST00000372459 ADCK5Q3MIX3 580 aa29.95■■■□□ 2.39
CTSA-203ENST00000372459 USPL1Q5W0Q7 1092 aa29.95■■■□□ 2.39
CTSA-203ENST00000372459 SEC62Q99442 399 aaKnown RBP29.95■■■□□ 2.39
CTSA-203ENST00000372459 QTRT2Q9H974 415 aaKnown RBP29.95■■■□□ 2.39
CTSA-203ENST00000372459 CYP46A1Q9Y6A2 500 aa29.95■■■□□ 2.39
CTSA-203ENST00000372459 RNF113AO15541 343 aaKnown RBP29.95■■■□□ 2.38
CTSA-203ENST00000372459 PSMA5P28066 241 aa29.95■■■□□ 2.38
CTSA-203ENST00000372459 SSFA2P28290 1259 aa29.95■■■□□ 2.38
CTSA-203ENST00000372459 PUM3Q15397 648 aaKnown RBP29.95■■■□□ 2.38
CTSA-203ENST00000372459 ZMYM1Q5SVZ6 1142 aa29.95■■■□□ 2.38
CTSA-203ENST00000372459 ZNF512BQ96KM6 892 aaPredicted RBP29.95■■■□□ 2.38
CTSA-203ENST00000372459 SEC31BQ9NQW1 1179 aa29.95■■■□□ 2.38
CTSA-203ENST00000372459 RTCBQ9Y3I0 505 aaKnown RBP29.95■■■□□ 2.38
CTSA-203ENST00000372459 IGHMBP2P38935 993 aaKnown RBP29.94■■■□□ 2.38
CTSA-203ENST00000372459 AK2P54819 239 aa29.94■■■□□ 2.38
CTSA-203ENST00000372459 DDX11L8A8MPP1 907 aa29.94■■■□□ 2.38
CTSA-203ENST00000372459 VPS53Q5VIR6 699 aa29.94■■■□□ 2.38
CTSA-203ENST00000372459 CCDC129Q6ZRS4 1044 aa29.94■■■□□ 2.38
CTSA-203ENST00000372459 LPIN2Q92539 896 aa29.94■■■□□ 2.38
CTSA-203ENST00000372459 U3KPZ7 1027 aaPredicted RBP29.94■■■□□ 2.38
CTSA-203ENST00000372459 RUFY3Q7L099 469 aa29.93■■■□□ 2.38
CTSA-203ENST00000372459 BCL2L12Q9HB09 334 aa29.93■■■□□ 2.38
CTSA-203ENST00000372459 PDRG1Q9NUG6 133 aa29.93■■■□□ 2.38
CTSA-203ENST00000372459 RPAP1Q9BWH6 1393 aaPredicted RBP29.93■■■□□ 2.38
CTSA-203ENST00000372459 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 ZPR1O75312 459 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 TSGA10IPQ3SY00 556 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 SCARF1Q14162 830 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 TBC1D9BQ66K14 1250 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 BCL11BQ9C0K0 894 aaPredicted RBP29.92■■■□□ 2.38
CTSA-203ENST00000372459 LIMCH1Q9UPQ0 1083 aa29.92■■■□□ 2.38
CTSA-203ENST00000372459 ZFYP08048 801 aaPredicted RBP29.91■■■□□ 2.38
CTSA-203ENST00000372459 FGFR2P21802 821 aa29.91■■■□□ 2.38
CTSA-203ENST00000372459 ZAP70P43403 619 aa29.91■■■□□ 2.38
CTSA-203ENST00000372459 ERFEQ4G0M1 354 aa29.91■■■□□ 2.38
CTSA-203ENST00000372459 CYP2E1P05181 493 aaPredicted RBP29.9■■■□□ 2.38
CTSA-203ENST00000372459 CPA1P15085 419 aa29.9■■■□□ 2.38
CTSA-203ENST00000372459 BICDL1Q6ZP65 573 aa29.9■■■□□ 2.38
CTSA-203ENST00000372459 SMIM5Q71RC9 77 aa29.9■■■□□ 2.38
CTSA-203ENST00000372459 CDC5LQ99459 802 aaKnown RBP29.9■■■□□ 2.38
CTSA-203ENST00000372459 NYXQ9GZU5 481 aa29.9■■■□□ 2.38
CTSA-203ENST00000372459 ARAP2Q8WZ64 1704 aa29.89■■■□□ 2.38
CTSA-203ENST00000372459 SLC5A1P13866 664 aa29.89■■■□□ 2.38
CTSA-203ENST00000372459 KRT32Q14532 448 aa29.89■■■□□ 2.38
CTSA-203ENST00000372459 HELBQ8NG08 1087 aaPredicted RBP29.89■■■□□ 2.38
CTSA-203ENST00000372459 UQCRFS1P1P0C7P4 283 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 MCAMP43121 646 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 CLEC17AQ6ZS10 378 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 SETDB2Q96T68 719 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 DSCC1Q9BVC3 393 aa29.88■■■□□ 2.37
CTSA-203ENST00000372459 SRP68Q9UHB9 627 aaKnown RBP29.88■■■□□ 2.37
CTSA-203ENST00000372459 GTF2E1P29083 439 aaPredicted RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms