RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
KDM4A-201ENST00000372396 TPM4P67936 248 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 TFCP2Q12800 502 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
KDM4A-201ENST00000372396 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 ZNF592Q92610 1267 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 EYA2O00167 538 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 CCDC112Q8NEF3 446 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 CYP27B1O15528 508 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 TPM3P06753 285 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
KDM4A-201ENST00000372396 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 CCDC91Q7Z6B0 441 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 TSPY26PQ9H489 355 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 NIP7Q9Y221 180 aaKnown RBP eCLIP11.73□□□□□ -0.53
KDM4A-201ENST00000372396 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
KDM4A-201ENST00000372396 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
KDM4A-201ENST00000372396 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
KDM4A-201ENST00000372396 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
KDM4A-201ENST00000372396 BICD2Q8TD16 824 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 ZNF526Q8TF50 670 aaPredicted RBP11.72□□□□□ -0.53
KDM4A-201ENST00000372396 MST1RQ04912 1400 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 TNNI3KQ59H18 835 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
KDM4A-201ENST00000372396 FPGT-TNNI3KV9GXZ4 949 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 NYXQ9GZU5 481 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
KDM4A-201ENST00000372396 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.53
KDM4A-201ENST00000372396 MCMDC2Q4G0Z9 681 aa11.71□□□□□ -0.53
KDM4A-201ENST00000372396 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
KDM4A-201ENST00000372396 DRC1Q96MC2 740 aa11.71□□□□□ -0.53
KDM4A-201ENST00000372396 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
KDM4A-201ENST00000372396 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
KDM4A-201ENST00000372396 STAP2Q9UGK3 403 aa11.71□□□□□ -0.53
KDM4A-201ENST00000372396 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
KDM4A-201ENST00000372396 XBP1P17861 261 aa11.71□□□□□ -0.54
KDM4A-201ENST00000372396 RFC4P35249 363 aa11.71□□□□□ -0.54
KDM4A-201ENST00000372396 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.54
KDM4A-201ENST00000372396 ICE2Q659A1 982 aa11.71□□□□□ -0.54
KDM4A-201ENST00000372396 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.54
KDM4A-201ENST00000372396 MMP14P50281 582 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 STK3Q13188 491 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 TXLNBQ8N3L3 684 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
KDM4A-201ENST00000372396 BRMS1Q9HCU9 246 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CDKL5O76039 1030 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CLSTN1O94985 981 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CCDC172P0C7W6 258 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 TERF2Q15554 542 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
KDM4A-201ENST00000372396 SETDB2Q96T68 719 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 RBM8AQ9Y5S9 174 aaKnown RBP11.7□□□□□ -0.54
KDM4A-201ENST00000372396 PDE8AO60658 829 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CCDC73Q6ZRK6 1079 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 ANKRD18AQ8IVF6 992 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 PIBF1Q8WXW3 757 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 RBSNQ9H1K0 784 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 SYCE3A1L190 88 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 KRT85P78386 507 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 CCDC83Q8IWF9 413 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
KDM4A-201ENST00000372396 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
KDM4A-201ENST00000372396 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
KDM4A-201ENST00000372396 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 CPDO75976 1380 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
KDM4A-201ENST00000372396 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
KDM4A-201ENST00000372396 POLA2Q14181 598 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
KDM4A-201ENST00000372396 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 ZNF213O14771 459 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 ZNF445P59923 1031 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 TTC31Q49AM3 519 aaPredicted RBP11.68□□□□□ -0.54
KDM4A-201ENST00000372396 NLRP3Q96P20 1036 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 NAPBQ9H115 298 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
KDM4A-201ENST00000372396 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms