RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ZMYM3Q14202 1370 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 ZBTB43O43298 467 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 EVCP57679 992 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
COL17A1-202ENST00000369733 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 ZBTB9Q96C00 473 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 SLC5A1P13866 664 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 TTC31Q49AM3 519 aaPredicted RBP18.21■□□□□ 0.51
COL17A1-202ENST00000369733 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 TMCO5BA8MYB1 307 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 TUBB4BP68371 445 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 APOBRQ0VD83 1088 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
COL17A1-202ENST00000369733 CLSTN2Q9H4D0 955 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 SPAG1Q07617 926 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 RAB34Q9BZG1 259 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
COL17A1-202ENST00000369733 PHACTR2O75167 634 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 ELF2Q15723 593 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 RASSF4Q9H2L5 321 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 GOLGA6L10A0A0M3HER8 536 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 GRM8O00222 908 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 AKR1B10O60218 316 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 CCDC96Q2M329 555 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 MKNK2Q9HBH9 465 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 ANKRD18BA2A2Z9 1011 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 KRBA2Q6ZNG9 492 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 SNX14Q9Y5W7 946 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 RHOXF2BP0C7M4 288 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 UBA7P41226 1012 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 AMPD3Q01432 767 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 FAM160A1Q05DH4 1040 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 ZNF569Q5MCW4 686 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 TSC1Q92574 1164 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 RHOXF2Q9BQY4 288 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 TCP11L1Q9NUJ3 509 aa18.2■□□□□ 0.5
COL17A1-202ENST00000369733 CWC25Q9NXE8 425 aaPredicted RBP18.2■□□□□ 0.5
COL17A1-202ENST00000369733 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 OPA1O60313 960 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 ZNF76P36508 570 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 SSR1P43307 286 aaKnown RBP18.19■□□□□ 0.5
COL17A1-202ENST00000369733 TMEM132AQ24JP5 1023 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 BRD1O95696 1058 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 CCDC40Q4G0X9 1142 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 PRDM11Q9NQV5 511 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 RAD50Q92878 1312 aa18.19■□□□□ 0.5
COL17A1-202ENST00000369733 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
COL17A1-202ENST00000369733 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 HDXQ7Z353 690 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 EZRP15311 586 aaKnown RBP18.18■□□□□ 0.5
COL17A1-202ENST00000369733 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
COL17A1-202ENST00000369733 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 PRC1O43663 620 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 MYO1BO43795 1136 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 ZFYP08048 801 aaPredicted RBP18.18■□□□□ 0.5
COL17A1-202ENST00000369733 NOP2P46087 812 aaKnown RBP18.18■□□□□ 0.5
COL17A1-202ENST00000369733 PPP2R3AQ06190 1150 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 DRC1Q96MC2 740 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 UBA5Q9GZZ9 404 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 A2MP01023 1474 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 A0A1B0GVL5 298 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 ATP2C2O75185 946 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 CALML4Q96GE6 196 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
COL17A1-202ENST00000369733 EBAG9O00559 213 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 CHST3Q7LGC8 479 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 BAG1Q99933 345 aaPredicted RBP18.17■□□□□ 0.5
COL17A1-202ENST00000369733 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 SPECC1LQ69YQ0 1117 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
COL17A1-202ENST00000369733 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 FANCAO15360 1455 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 IDEP14735 1019 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 NF2P35240 595 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 DHX32Q7L7V1 743 aaKnown RBP18.17■□□□□ 0.5
COL17A1-202ENST00000369733 HSPA4P34932 840 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
COL17A1-202ENST00000369733 GSTTP1A0A1W2PQM5 241 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 BMP15O95972 392 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 MYL5Q02045 173 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 WTAPQ15007 396 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 BRAPQ7Z569 592 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 TRMT112Q9UI30 125 aaKnown RBP18.16■□□□□ 0.5
COL17A1-202ENST00000369733 RPS6KB1P23443 525 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 LDHAL6AQ6ZMR3 332 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 DHX58Q96C10 678 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 ATRIPQ8WXE1 791 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 CAPZA3Q96KX2 299 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
COL17A1-202ENST00000369733 ATP10BO94823 1461 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms