RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 CKAP2LQ8IYA6 745 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 ORC3Q9UBD5 711 aaPredicted RBP11.35□□□□□ -0.59
SCAF11-202ENST00000369367 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
SCAF11-202ENST00000369367 PUM3Q15397 648 aaKnown RBP11.35□□□□□ -0.59
SCAF11-202ENST00000369367 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 TESK2Q96S53 571 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■■■■□ 20.4
SCAF11-202ENST00000369367 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 H7C1D1 291 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 RTN1Q16799 776 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 TTLL5Q6EMB2 1281 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC82Q8N4S0 544 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 RNF214Q8ND24 703 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 MCM9Q9NXL9 1143 aa11.35□□□□□ -0.59
SCAF11-202ENST00000369367 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
SCAF11-202ENST00000369367 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC174Q6PII3 467 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 ZSCAN16Q9H4T2 348 aaPredicted RBP11.34□□□□□ -0.59
SCAF11-202ENST00000369367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■□ 23.9
SCAF11-202ENST00000369367 GPR162Q16538 588 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 GNA11P29992 359 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 RRP36Q96EU6 259 aaKnown RBP11.34□□□□□ -0.59
SCAF11-202ENST00000369367 RAD50Q92878 1312 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 ABCA8O94911 1581 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 EPB41L2O43491 1005 aaKnown RBP11.34□□□□□ -0.59
SCAF11-202ENST00000369367 CCDC172P0C7W6 258 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 FBLN1P23142 703 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 ANAPC15P60006 121 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 SYCP3Q8IZU3 236 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
SCAF11-202ENST00000369367 ARHGEF6Q15052 776 aa11.34□□□□□ -0.59
SCAF11-202ENST00000369367 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.59
SCAF11-202ENST00000369367 MEIS3Q99687 375 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 RMND1Q9NWS8 449 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 C8orf58Q8NAV2 365 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 NFKBIBQ15653 356 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 RSPH6AQ9H0K4 717 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 SPA17Q15506 151 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
SCAF11-202ENST00000369367 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 LTKP29376 864 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 SEPT7Q16181 437 aaKnown RBP11.33□□□□□ -0.6
SCAF11-202ENST00000369367 TSPOAP1O95153 1857 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
SCAF11-202ENST00000369367 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 GOLGA6L10A6NI86 522 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 EYA2O00167 538 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 PLS1Q14651 629 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 HECW2Q9P2P5 1572 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 KDM5CP41229 1560 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 HAND2P61296 217 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-202ENST00000369367 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-202ENST00000369367 MROH5Q6ZUA9 1318 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 CAVIN2O95810 425 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
SCAF11-202ENST00000369367 STX6O43752 255 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 NEFHP12036 1026 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 PZPP20742 1482 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 SSR1P43307 286 aaKnown RBP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 NAPAP54920 295 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 MPNDQ8N594 471 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 PNMA2Q9UL42 364 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 CHD1O14646 1710 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 KLF18A0A0U1RQI7 1052 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 BICD1Q96G01 975 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 SLC5A4Q9NY91 659 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 VAMP4O75379 141 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 IL13P35225 146 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 ITGA6P23229 1130 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 CCT2P78371 535 aaKnown RBP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
SCAF11-202ENST00000369367 THRAP3Q9Y2W1 955 aaKnown RBP11.31□□□□□ -0.6
SCAF11-202ENST00000369367 IDEP14735 1019 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 PDE1AP54750 535 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 MAGEB6Q8N7X4 407 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 NUCB1Q02818 461 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
SCAF11-202ENST00000369367 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
SCAF11-202ENST00000369367 KDM6BO15054 1643 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms