RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SOS1Q07889 1333 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-205ENST00000368213 EIF5P55010 431 aaKnown RBP12.44□□□□□ -0.42
PTPRK-205ENST00000368213 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
PTPRK-205ENST00000368213 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-205ENST00000368213 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 ZNF526Q8TF50 670 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-205ENST00000368213 CDR1P51861 262 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 PUM3Q15397 648 aaKnown RBP12.43□□□□□ -0.42
PTPRK-205ENST00000368213 CCDC181Q5TID7 509 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 SYCP3Q8IZU3 236 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 TESK2Q96S53 571 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 NOD1Q9Y239 953 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 IL13P35225 146 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
PTPRK-205ENST00000368213 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 NAPAP54920 295 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-205ENST00000368213 ZBTB43O43298 467 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 AFF2P51816 1311 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 IDEP14735 1019 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 TNNT3P45378 269 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-205ENST00000368213 NCBP1Q09161 790 aaKnown RBP12.42□□□□□ -0.42
PTPRK-205ENST00000368213 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-205ENST00000368213 AMPD3Q01432 767 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 RTN1Q16799 776 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-205ENST00000368213 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
PTPRK-205ENST00000368213 LOC102724428A0A0B4J2F2 783 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
PTPRK-205ENST00000368213 NBPF7P0C2Y1 421 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-205ENST00000368213 PHKG2P15735 406 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 SIK1P57059 783 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
PTPRK-205ENST00000368213 LIMCH1Q9UPQ0 1083 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
PTPRK-205ENST00000368213 CSADQ9Y600 493 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 TBCAO75347 108 aaKnown RBP12.41□□□□□ -0.42
PTPRK-205ENST00000368213 GSE1Q14687 1217 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 KIF22Q14807 665 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 NUP62CLQ9H1M0 184 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 ADGRL2O95490 1459 aa12.41□□□□□ -0.42
PTPRK-205ENST00000368213 UBA7P41226 1012 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 FGFR1OPO95684 399 aaKnown RBP12.4□□□□□ -0.42
PTPRK-205ENST00000368213 CALM1P0DP23 149 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 CALM2P0DP24 149 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 CALM3P0DP25 149 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
PTPRK-205ENST00000368213 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-205ENST00000368213 EYA2O00167 538 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 TAF5LO75529 589 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 KLHL10Q6JEL2 608 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-205ENST00000368213 C6orf50Q9HD87 102 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 METP08581 1390 aa12.4□□□□□ -0.42
PTPRK-205ENST00000368213 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
PTPRK-205ENST00000368213 HOXB7P09629 217 aa12.4□□□□□ -0.43
PTPRK-205ENST00000368213 CETN1Q12798 172 aa12.4□□□□□ -0.43
PTPRK-205ENST00000368213 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.43
PTPRK-205ENST00000368213 SULF1Q8IWU6 871 aa12.4□□□□□ -0.43
PTPRK-205ENST00000368213 PPFIA3O75145 1194 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 ARHGEF12Q9NZN5 1544 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 ZCCHC11Q5TAX3 1644 aaKnown RBP12.39□□□□□ -0.43
PTPRK-205ENST00000368213 CCP110O43303 1012 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 TCP10Q12799 353 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 TTC22Q5TAA0 569 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 ANKRD44Q8N8A2 993 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 PZPP20742 1482 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-205ENST00000368213 ZNF397Q8NF99 534 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-205ENST00000368213 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
PTPRK-205ENST00000368213 VAMP4O75379 141 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
PTPRK-205ENST00000368213 SP4Q02446 784 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 TRAK2O60296 914 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 MBD4O95243 580 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 ABCA8O94911 1581 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 SBNO2Q9Y2G9 1366 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 LRRC27Q9C0I9 530 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 HECW2Q9P2P5 1572 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 CETN2P41208 172 aa12.38□□□□□ -0.43
PTPRK-205ENST00000368213 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-205ENST00000368213 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms