RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 PDE8BO95263 885 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 LSG1Q9H089 658 aaKnown RBP12.11□□□□□ -0.47
SRPK1-202ENST00000361690 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 SLC5A1P13866 664 aa12.11□□□□□ -0.47
SRPK1-202ENST00000361690 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
SRPK1-202ENST00000361690 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 RXRBP28702 533 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 HSPA4P34932 840 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 PUM3Q15397 648 aaKnown RBP12.1□□□□□ -0.47
SRPK1-202ENST00000361690 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
SRPK1-202ENST00000361690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
SRPK1-202ENST00000361690 ADRA2BP18089 450 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 CHMP5Q9NZZ3 219 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 PALD1Q9ULE6 856 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 CICQ96RK0 1608 aaPredicted RBP12.09□□□□□ -0.47
SRPK1-202ENST00000361690 MCM2P49736 904 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
SRPK1-202ENST00000361690 LPIN2Q92539 896 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 LRRC4BQ9NT99 713 aa12.09□□□□□ -0.47
SRPK1-202ENST00000361690 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
SRPK1-202ENST00000361690 PRPF40BQ6NWY9 871 aaKnown RBP12.09□□□□□ -0.47
SRPK1-202ENST00000361690 UPF3BQ9BZI7 483 aaKnown RBP12.08□□□□□ -0.47
SRPK1-202ENST00000361690 RREB1Q92766 1687 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 PTH1RQ03431 593 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 NOL8Q76FK4 1167 aaKnown RBP12.08□□□□□ -0.48
SRPK1-202ENST00000361690 RBM8AQ9Y5S9 174 aaKnown RBP12.08□□□□□ -0.48
SRPK1-202ENST00000361690 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
SRPK1-202ENST00000361690 RFX7Q2KHR2 1363 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 TAF5LO75529 589 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 SF3B3Q15393 1217 aaKnown RBP12.08□□□□□ -0.48
SRPK1-202ENST00000361690 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
SRPK1-202ENST00000361690 APBA3O96018 575 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 TXNRD1Q16881 649 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 RIC1Q4ADV7 1423 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 RTL9Q8NET4 1388 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.483e-7■□□□□ 10.1
SRPK1-202ENST00000361690 ZAP70P43403 619 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 SNX14Q9Y5W7 946 aa12.07□□□□□ -0.48
SRPK1-202ENST00000361690 TUBGCP6Q96RT7 1819 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
SRPK1-202ENST00000361690 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 ZFYP08048 801 aaPredicted RBP12.06□□□□□ -0.48
SRPK1-202ENST00000361690 TICAM2Q86XR7 235 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 CHRNDQ07001 517 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
SRPK1-202ENST00000361690 CCDC102BQ68D86 513 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 ANTXR1Q9H6X2 564 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 SSFA2P28290 1259 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 JAKMIP1Q96N16 626 aaKnown RBP12.06□□□□□ -0.48
SRPK1-202ENST00000361690 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
SRPK1-202ENST00000361690 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 PSMA5P28066 241 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 PHKA1P46020 1223 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 NFIXQ14938 502 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 NFKBIBQ15653 356 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 MAP4K1Q92918 833 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 MYH3P11055 1940 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 CREB3L3Q68CJ9 461 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 VPS37DQ86XT2 251 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
SRPK1-202ENST00000361690 IDH1O75874 414 aaKnown RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 SEC62Q99442 399 aaKnown RBP12.05□□□□□ -0.48
SRPK1-202ENST00000361690 SCARF1Q14162 830 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 GNL3LQ9NVN8 582 aaKnown RBP12.04□□□□□ -0.48
SRPK1-202ENST00000361690 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
SRPK1-202ENST00000361690 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 SNAP23O00161 211 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 ST5P78524 1137 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
SRPK1-202ENST00000361690 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
SRPK1-202ENST00000361690 MCAMP43121 646 aa12.03□□□□□ -0.48
SRPK1-202ENST00000361690 FGFR2P21802 821 aa12.03□□□□□ -0.48
SRPK1-202ENST00000361690 NECTIN1Q15223 517 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms