RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TSPY8P0CW00 308 aa16.14■□□□□ 0.18
CTR9-201ENST00000361367 SSFA2P28290 1259 aa16.14■□□□□ 0.18
CTR9-201ENST00000361367 TTLL7Q6ZT98 887 aa16.14■□□□□ 0.18
CTR9-201ENST00000361367 IL27Q8NEV9 243 aa16.14■□□□□ 0.18
CTR9-201ENST00000361367 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.18
CTR9-201ENST00000361367 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 GNAT2P19087 354 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 NAP1L1P55209 391 aaKnown RBP16.14■□□□□ 0.17
CTR9-201ENST00000361367 SIK1P57059 783 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.17
CTR9-201ENST00000361367 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
CTR9-201ENST00000361367 UFL1O94874 794 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 SERPINC1P01008 464 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 CHMLP26374 656 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 ARID3AQ99856 593 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 PLCG2P16885 1265 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 WDR78Q5VTH9 848 aa16.14■□□□□ 0.17
CTR9-201ENST00000361367 ZBTB43O43298 467 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 STX6O43752 255 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 CUL5Q93034 780 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 SLC26A6Q9BXS9 759 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 BAG6P46379 1132 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 USP44Q9H0E7 712 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 ADGRB3O60242 1522 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
CTR9-201ENST00000361367 NECAB1Q8N987 351 aa16.13■□□□□ 0.17
CTR9-201ENST00000361367 CCDC12Q8WUD4 166 aaPredicted RBP16.13■□□□□ 0.17
CTR9-201ENST00000361367 MCM9Q9NXL9 1143 aa16.12■□□□□ 0.17
CTR9-201ENST00000361367 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
CTR9-201ENST00000361367 CCDC70Q6NSX1 233 aa16.12■□□□□ 0.17
CTR9-201ENST00000361367 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
CTR9-201ENST00000361367 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
CTR9-201ENST00000361367 IFIT1BQ5T764 474 aaKnown RBP16.12■□□□□ 0.17
CTR9-201ENST00000361367 CT47A1Q5JQC4 288 aaPredicted RBP16.12■□□□□ 0.17
CTR9-201ENST00000361367 CCDC39Q9UFE4 941 aa16.12■□□□□ 0.17
CTR9-201ENST00000361367 ABCC4O15439 1325 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 TNIP1Q15025 636 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 MAP3K11Q16584 847 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 DIP2CQ9Y2E4 1556 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 RAD50Q92878 1312 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 TAF5LO75529 589 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
CTR9-201ENST00000361367 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 RAB34Q9BZG1 259 aa16.11■□□□□ 0.17
CTR9-201ENST00000361367 CDK12Q9NYV4 1490 aaPredicted RBP16.1■□□□□ 0.17
CTR9-201ENST00000361367 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 GGA1Q9UJY5 639 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 PRC1O43663 620 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 WWC2Q6AWC2 1192 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
CTR9-201ENST00000361367 CAMK4Q16566 473 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 Q6ZUG5 572 aa16.1■□□□□ 0.17
CTR9-201ENST00000361367 LPIN2Q92539 896 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 CREB3L3Q68CJ9 461 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 SMARCE1Q969G3 411 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 GLI2P10070 1586 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 KDRP35968 1356 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 H0YIN7 160 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 MBD4O95243 580 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 RTN1Q16799 776 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 DHX8Q14562 1220 aaKnown RBP16.09■□□□□ 0.17
CTR9-201ENST00000361367 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
CTR9-201ENST00000361367 RBM26Q5T8P6 1007 aaKnown RBP16.09■□□□□ 0.17
CTR9-201ENST00000361367 FAM182BQ5T319 152 aa16.08■□□□□ 0.17
CTR9-201ENST00000361367 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.17
CTR9-201ENST00000361367 TMEM266Q2M3C6 531 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 SPC24Q8NBT2 197 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 GDPD2Q9HCC8 539 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 PAXIP1Q6ZW49 1069 aaPredicted RBP16.08■□□□□ 0.16
CTR9-201ENST00000361367 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 CEP152O94986 1710 aa16.08■□□□□ 0.16
CTR9-201ENST00000361367 SYCE3A1L190 88 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 RPS8P62241 208 aaKnown RBP16.07■□□□□ 0.16
CTR9-201ENST00000361367 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 GNAQP50148 359 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
CTR9-201ENST00000361367 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 CTSWP56202 376 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 ZNF772Q68DY9 489 aaPredicted RBP16.07■□□□□ 0.16
CTR9-201ENST00000361367 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
CTR9-201ENST00000361367 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
CTR9-201ENST00000361367 FAM196AQ6ZSG2 479 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 CHST3Q7LGC8 479 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 MROH5Q6ZUA9 1318 aa16.06■□□□□ 0.16
CTR9-201ENST00000361367 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
CTR9-201ENST00000361367 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms