RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
CSNK1E-201ENST00000359867 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
CSNK1E-201ENST00000359867 SIL1Q9H173 461 aa16.81■□□□□ 0.28
CSNK1E-201ENST00000359867 GREM2Q9H772 168 aa16.81■□□□□ 0.28
CSNK1E-201ENST00000359867 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 LAMB2P55268 1798 aa16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 CSF1RP07333 972 aa16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 CHMLP26374 656 aa16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 CASZ1Q86V15 1759 aa16.8■□□□□ 0.28
CSNK1E-201ENST00000359867 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 GOLGA6L3A6NEY3 463 aa16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 GLRX3O76003 335 aaKnown RBP16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 RABEP1Q15276 862 aa16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 COPRSQ9NQ92 184 aa16.79■□□□□ 0.28
CSNK1E-201ENST00000359867 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 ZBTB7AO95365 584 aa16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 IFIT2P09913 472 aaKnown RBP16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 ITGA6P23229 1130 aa16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 CCDC57Q2TAC2 916 aa16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
CSNK1E-201ENST00000359867 SASH1O94885 1247 aa16.77■□□□□ 0.28
CSNK1E-201ENST00000359867 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
CSNK1E-201ENST00000359867 ECHDC1Q9NTX5 307 aa16.77■□□□□ 0.28
CSNK1E-201ENST00000359867 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
CSNK1E-201ENST00000359867 TRAK2O60296 914 aa16.77■□□□□ 0.27
CSNK1E-201ENST00000359867 IFIT5Q13325 482 aaKnown RBP16.77■□□□□ 0.27
CSNK1E-201ENST00000359867 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.27
CSNK1E-201ENST00000359867 TAF1P21675 1872 aa16.77■□□□□ 0.27
CSNK1E-201ENST00000359867 COL4A1P02462 1669 aa16.76■□□□□ 0.27
CSNK1E-201ENST00000359867 GOLGB1Q14789 3259 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-201ENST00000359867 ST5P78524 1137 aa16.76■□□□□ 0.27
CSNK1E-201ENST00000359867 NLRP3Q96P20 1036 aa16.76■□□□□ 0.27
CSNK1E-201ENST00000359867 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
CSNK1E-201ENST00000359867 CCDC152Q4G0S7 254 aa16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 TAF7LQ5H9L4 462 aa16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 AACSQ86V21 672 aa16.75■□□□□ 0.27
CSNK1E-201ENST00000359867 PDE4CQ08493 712 aa16.74■□□□□ 0.27
CSNK1E-201ENST00000359867 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
CSNK1E-201ENST00000359867 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-201ENST00000359867 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
CSNK1E-201ENST00000359867 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
CSNK1E-201ENST00000359867 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 MCCP23508 829 aa16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 SF3B3Q15393 1217 aaKnown RBP16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 K7ELQ4 463 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
CSNK1E-201ENST00000359867 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
CSNK1E-201ENST00000359867 FSD2A1L4K1 749 aa16.72■□□□□ 0.27
CSNK1E-201ENST00000359867 ANAPC15P60006 121 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 PRDM4Q9UKN5 801 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 AK9Q5TCS8 1911 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 LDHAL6AQ6ZMR3 332 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 EVI5LQ96CN4 794 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 IL17RAQ96F46 866 aa16.71■□□□□ 0.27
CSNK1E-201ENST00000359867 EYA2O00167 538 aa16.7■□□□□ 0.26
CSNK1E-201ENST00000359867 MAP4K4O95819 1239 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-201ENST00000359867 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
CSNK1E-201ENST00000359867 CNNM1Q9NRU3 951 aa16.7■□□□□ 0.26
CSNK1E-201ENST00000359867 RTL9Q8NET4 1388 aa16.7■□□□□ 0.26
CSNK1E-201ENST00000359867 SGSM2O43147 1006 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 TFCP2Q12800 502 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 RUFY2Q8WXA3 655 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 MTFR1LQ9H019 292 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 ST18O60284 1047 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 DDIT3P35638 169 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 BRIP1Q9BX63 1249 aa16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-201ENST00000359867 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 RPGRQ92834 1020 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 MPHOSPH8Q99549 860 aa16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 HIP1O00291 1037 aa16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 LRP5O75197 1615 aa16.68■□□□□ 0.26
CSNK1E-201ENST00000359867 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
CSNK1E-201ENST00000359867 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms