RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PLCB3Q01970 1234 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 NME9Q86XW9 330 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 UBE2Q2Q8WVN8 375 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 DNM1Q05193 864 aaKnown RBP18.22■□□□□ 0.51
COL18A1-203ENST00000359759 WTAPQ15007 396 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 THEMISQ8N1K5 641 aaPredicted RBP18.22■□□□□ 0.51
COL18A1-203ENST00000359759 LMOD1P29536 600 aaPredicted RBP18.22■□□□□ 0.51
COL18A1-203ENST00000359759 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 LRRC27Q9C0I9 530 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 STX17P56962 302 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 ASIC1P78348 528 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 NBPF11Q86T75 865 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 CCDC77Q9BR77 488 aa18.22■□□□□ 0.51
COL18A1-203ENST00000359759 STMN4Q9H169 189 aaPredicted RBP18.22■□□□□ 0.51
COL18A1-203ENST00000359759 UBLCP1Q8WVY7 318 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-203ENST00000359759 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 PPP1R9BQ96SB3 815 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 FLIIQ13045 1269 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
COL18A1-203ENST00000359759 Q6ZUG5 572 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 UBXN1Q04323 297 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 STX8Q9UNK0 236 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 TSPY3P0CV98 308 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 TSPY8P0CW00 308 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-203ENST00000359759 LDHAL6AQ6ZMR3 332 aa18.21■□□□□ 0.51
COL18A1-203ENST00000359759 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.52e-6■■■■□ 25.4
COL18A1-203ENST00000359759 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
COL18A1-203ENST00000359759 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 EBAG9O00559 213 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 PLS1Q14651 629 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 CASKIN1Q8WXD9 1431 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 CALM1P0DP23 149 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 CALM2P0DP24 149 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 CALM3P0DP25 149 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 SEPT6Q14141 434 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 IGF1RP08069 1367 aa18.2■□□□□ 0.5
COL18A1-203ENST00000359759 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
COL18A1-203ENST00000359759 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-203ENST00000359759 MRPS27Q92552 414 aaKnown RBP18.2■□□□□ 0.5
COL18A1-203ENST00000359759 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
COL18A1-203ENST00000359759 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 CABP5Q9NP86 173 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 PLIN2Q99541 437 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-203ENST00000359759 ZBTB43O43298 467 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 PTPRCP08575 1304 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 PPP1R7Q15435 360 aa18.19■□□□□ 0.5
COL18A1-203ENST00000359759 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-203ENST00000359759 NESP48681 1621 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 KIF5AQ12840 1032 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 MRRFQ96E11 262 aaKnown RBP18.18■□□□□ 0.5
COL18A1-203ENST00000359759 TTC14Q96N46 770 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
COL18A1-203ENST00000359759 HMG20BQ9P0W2 317 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 FAM83GA6ND36 823 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 LRRC45Q96CN5 670 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 IQSEC3Q9UPP2 1182 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-203ENST00000359759 RTN1Q16799 776 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 KCNG4Q8TDN1 519 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 SDSP20132 328 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 ERMNQ8TAM6 284 aa18.18■□□□□ 0.5
COL18A1-203ENST00000359759 CFAP157Q5JU67 520 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 SLC4A4Q9Y6R1 1079 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-203ENST00000359759 ODF2LQ9ULJ1 636 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 F8W031 263 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-203ENST00000359759 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-203ENST00000359759 KCNH5Q8NCM2 988 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 SAMD15Q9P1V8 674 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
COL18A1-203ENST00000359759 BAG3O95817 575 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 ANXA1P04083 346 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 SEPT14Q6ZU15 432 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 SMC1BQ8NDV3 1235 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 SH3BP5O60239 455 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
COL18A1-203ENST00000359759 FAM13AO94988 1023 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 ATP2A1O14983 1001 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 CLCN1P35523 988 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 IFNKQ9P0W0 207 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 PSMA7O14818 248 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 ERCC5P28715 1186 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-203ENST00000359759 HPDP32754 393 aaPredicted RBP18.16■□□□□ 0.5
COL18A1-203ENST00000359759 KRT83P78385 493 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 GBP6Q6ZN66 633 aa18.16■□□□□ 0.5
COL18A1-203ENST00000359759 HGSO14964 777 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms