RNA–Protein interactions for RNA: ENST00000355081.3

KLHL28-201, Transcript of kelch like family member 28, humanhuman

TSL 1 (best) BASIC

Gene KLHL28, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-201ENST00000355081 NAT10Q9H0A0 1025 aaKnown RBP6.41□□□□□ -1.38
KLHL28-201ENST00000355081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.41□□□□□ -1.38
KLHL28-201ENST00000355081 NWD1Q149M9 1564 aa6.41□□□□□ -1.38
KLHL28-201ENST00000355081 TAF5LO75529 589 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 SASH1O94885 1247 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 HOXB7P09629 217 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 SFPQP23246 707 aaKnown RBP eCLIP6.4□□□□□ -1.38
KLHL28-201ENST00000355081 EIF4A1P60842 406 aaKnown RBP6.4□□□□□ -1.38
KLHL28-201ENST00000355081 NUTM2GQ5VZR2 741 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 NAA16Q6N069 864 aaPredicted RBP6.4□□□□□ -1.38
KLHL28-201ENST00000355081 SMARCC2Q8TAQ2 1214 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 SYTL4Q96C24 671 aaPredicted RBP6.4□□□□□ -1.38
KLHL28-201ENST00000355081 NEK1Q96PY6 1258 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 TSPYL1Q9H0U9 437 aa6.4□□□□□ -1.38
KLHL28-201ENST00000355081 TLR7Q9NYK1 1049 aaKnown RBP6.4□□□□□ -1.38
KLHL28-201ENST00000355081 PTPRUQ92729 1446 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 NPM3O75607 178 aaKnown RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ALDH1L1O75891 902 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ANXA1P04083 346 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 HSP90B1P14625 803 aaKnown RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ETF1P62495 437 aaKnown RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 SCRN1Q12765 414 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ATL3Q6DD88 541 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 Q6ZUG5 572 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 UBXN4Q92575 508 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ERCC4Q92889 916 aaPredicted RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 USP28Q96RU2 1077 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 XPO4Q9C0E2 1151 aaKnown RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 CCDC8Q9H0W5 538 aaPredicted RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 BOLA2Q9H3K6 86 aa6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ARGLU1Q9NWB6 273 aaPredicted RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 C9orf78Q9NZ63 289 aaPredicted RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 ORC3Q9UBD5 711 aaPredicted RBP6.4□□□□□ -1.39
KLHL28-201ENST00000355081 COL15A1P39059 1388 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 CEMIPQ8WUJ3 1361 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 PHLPP2Q6ZVD8 1323 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 SMC2O95347 1197 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 DHX8Q14562 1220 aaKnown RBP6.39□□□□□ -1.39
KLHL28-201ENST00000355081 DPCR1Q3MIW9 517 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 TEX35Q5T0J7 233 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 FMR1NBQ8N0W7 255 aaPredicted RBP6.39□□□□□ -1.39
KLHL28-201ENST00000355081 FSIP1Q8NA03 581 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 FBXW7Q969H0 707 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 BPIFA3Q9BQP9 254 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
KLHL28-201ENST00000355081 CHMP4AQ9BY43 222 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 UBXN6Q9BZV1 441 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 IFNKQ9P0W0 207 aa6.39□□□□□ -1.39
KLHL28-201ENST00000355081 MED1Q15648 1581 aaPredicted RBP6.39□□□□□ -1.39
KLHL28-201ENST00000355081 NRDCO43847 1150 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 PFKFB2O60825 505 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 HOXC9P31274 260 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 ME1P48163 572 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 TPM4P67936 248 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 G3BP1Q13283 466 aaKnown RBP eCLIP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 GORABQ5T7V8 394 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 HOMER1Q86YM7 354 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 NEK11Q8NG66 645 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 ZNF396Q96N95 335 aaPredicted RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 TRERF1Q96PN7 1200 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 SDF4Q9BRK5 362 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 FEZ2Q9UHY8 353 aaPredicted RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 DNAI1Q9UI46 699 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 MAP3K2Q9Y2U5 619 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 KDM3BQ7LBC6 1761 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 ABCC6O95255 1503 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 PIK3C2AO00443 1686 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 EFCAB8A8MWE9 144 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 FANCGO15287 622 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 POLR3GO15318 223 aaPredicted RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 CCP110O43303 1012 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 ATP8B1O43520 1251 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 TADA3O75528 432 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 CTDNEP1O95476 244 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 FOSBP53539 338 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 NCAPD2Q15021 1401 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 MUM1L1Q5H9M0 696 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 TRIM65Q6PJ69 517 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 ILDR1Q86SU0 546 aaPredicted RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 TXLNBQ8N3L3 684 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 MRPS27Q92552 414 aaKnown RBP6.38□□□□□ -1.39
KLHL28-201ENST00000355081 KAZALD1Q96I82 304 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 PCDHA7Q9UN72 937 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
KLHL28-201ENST00000355081 NEDD4P46934 1319 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 PTPDC1A2A3K4 754 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 KCNQ3O43525 872 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 SEC31AO94979 1220 aaKnown RBP6.37□□□□□ -1.39
KLHL28-201ENST00000355081 TBC1D8O95759 1140 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 CYP21A2P08686 494 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 HDGFP51858 240 aaKnown RBP6.37□□□□□ -1.39
KLHL28-201ENST00000355081 NDUFA8P51970 172 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 ST5P78524 1137 aa6.37□□□□□ -1.39
KLHL28-201ENST00000355081 MAPK8IP2Q13387 824 aaPredicted RBP6.37□□□□□ -1.39
KLHL28-201ENST00000355081 NCAPHQ15003 741 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms