RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TOM1L2Q6ZVM7 507 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 KBTBD3Q8NAB2 608 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 SCAND2PQ9GZW5 306 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-201ENST00000354547 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.29
COL13A1-201ENST00000354547 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
COL13A1-201ENST00000354547 TYRO3Q06418 890 aa23.13■■□□□ 1.29
COL13A1-201ENST00000354547 SCRN1Q12765 414 aa23.13■■□□□ 1.29
COL13A1-201ENST00000354547 TSGA10IPQ3SY00 556 aa23.13■■□□□ 1.29
COL13A1-201ENST00000354547 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
COL13A1-201ENST00000354547 CWC25Q9NXE8 425 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-201ENST00000354547 NR1I2O75469 434 aa23.12■■□□□ 1.29
COL13A1-201ENST00000354547 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
COL13A1-201ENST00000354547 NOLC1Q14978 699 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL13A1-201ENST00000354547 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
COL13A1-201ENST00000354547 NCOA5Q9HCD5 579 aaKnown RBP23.12■■□□□ 1.29
COL13A1-201ENST00000354547 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL13A1-201ENST00000354547 FTOQ9C0B1 505 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL13A1-201ENST00000354547 ANO6Q4KMQ2 910 aa23.11■■□□□ 1.29
COL13A1-201ENST00000354547 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
COL13A1-201ENST00000354547 MRVI1Q9Y6F6 885 aa23.11■■□□□ 1.29
COL13A1-201ENST00000354547 ZNF142P52746 1687 aaPredicted RBP23.11■■□□□ 1.29
COL13A1-201ENST00000354547 PGBD1Q96JS3 809 aa23.11■■□□□ 1.29
COL13A1-201ENST00000354547 CAMTA1Q9Y6Y1 1673 aa23.1■■□□□ 1.29
COL13A1-201ENST00000354547 TSC1Q92574 1164 aa23.1■■□□□ 1.29
COL13A1-201ENST00000354547 H7C1W4 665 aa23.1■■□□□ 1.29
COL13A1-201ENST00000354547 IFIT1P09914 478 aaKnown RBP23.1■■□□□ 1.29
COL13A1-201ENST00000354547 SASS6Q6UVJ0 657 aa23.1■■□□□ 1.29
COL13A1-201ENST00000354547 ALDH8A1Q9H2A2 487 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-201ENST00000354547 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
COL13A1-201ENST00000354547 AFDNP55196 1824 aaKnown RBP23.09■■□□□ 1.29
COL13A1-201ENST00000354547 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
COL13A1-201ENST00000354547 TTLL5Q6EMB2 1281 aa23.09■■□□□ 1.29
COL13A1-201ENST00000354547 PIBF1Q8WXW3 757 aa23.09■■□□□ 1.29
COL13A1-201ENST00000354547 JCADQ9P266 1359 aa23.09■■□□□ 1.29
COL13A1-201ENST00000354547 ZCRB1Q8TBF4 217 aaKnown RBP23.08■■□□□ 1.29
COL13A1-201ENST00000354547 FAM200AQ8TCP9 573 aa23.08■■□□□ 1.29
COL13A1-201ENST00000354547 ELP1O95163 1332 aa23.08■■□□□ 1.29
COL13A1-201ENST00000354547 A0A1B0GUL7 405 aa23.08■■□□□ 1.29
COL13A1-201ENST00000354547 DRC7Q8IY82 874 aa23.08■■□□□ 1.29
COL13A1-201ENST00000354547 GORABQ5T7V8 394 aa23.08■■□□□ 1.28
COL13A1-201ENST00000354547 STRN4Q9NRL3 753 aa23.08■■□□□ 1.28
COL13A1-201ENST00000354547 MST1RQ04912 1400 aa23.08■■□□□ 1.28
COL13A1-201ENST00000354547 ADAMTS7Q9UKP4 1686 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 TERF1P54274 439 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 HAND2P61296 217 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 FAM177BA6PVY3 158 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 RESTQ13127 1097 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 DHX32Q7L7V1 743 aaKnown RBP23.07■■□□□ 1.28
COL13A1-201ENST00000354547 PYCARDQ9ULZ3 195 aa23.07■■□□□ 1.28
COL13A1-201ENST00000354547 CBX8Q9HC52 389 aa23.06■■□□□ 1.28
COL13A1-201ENST00000354547 MRC1P22897 1456 aa23.06■■□□□ 1.28
COL13A1-201ENST00000354547 HSPD1P10809 573 aaKnown RBP23.06■■□□□ 1.28
COL13A1-201ENST00000354547 DNAJC25Q9H1X3 360 aa23.06■■□□□ 1.28
COL13A1-201ENST00000354547 RAB11FIP4Q86YS3 637 aa23.06■■□□□ 1.28
COL13A1-201ENST00000354547 KCNF1Q9H3M0 494 aa23.06■■□□□ 1.28
COL13A1-201ENST00000354547 GPHNQ9NQX3 736 aaPredicted RBP23.06■■□□□ 1.28
COL13A1-201ENST00000354547 PTPDC1A2A3K4 754 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 EYA2O00167 538 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
COL13A1-201ENST00000354547 WASHC4Q2M389 1173 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 A0A087WWV3 80 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 E7EWF7 191 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 FBXW7Q969H0 707 aa23.05■■□□□ 1.28
COL13A1-201ENST00000354547 PDIA4P13667 645 aaKnown RBP23.04■■□□□ 1.28
COL13A1-201ENST00000354547 PTGS1P23219 599 aa23.04■■□□□ 1.28
COL13A1-201ENST00000354547 ADORA1P30542 326 aa23.04■■□□□ 1.28
COL13A1-201ENST00000354547 GLIPR1L2Q4G1C9 344 aa23.04■■□□□ 1.28
COL13A1-201ENST00000354547 NSUN7Q8NE18 718 aaKnown RBP23.04■■□□□ 1.28
COL13A1-201ENST00000354547 PDCL3Q9H2J4 239 aa23.04■■□□□ 1.28
COL13A1-201ENST00000354547 DDX19AQ9NUU7 478 aaKnown RBP23.04■■□□□ 1.28
COL13A1-201ENST00000354547 ALS2Q96Q42 1657 aa23.04■■□□□ 1.28
COL13A1-201ENST00000354547 M0R2C6 588 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 CTDNEP1O95476 244 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 TRIM5Q9C035 493 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 CLSTN2Q9H4D0 955 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 MAST3O60307 1309 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 CEP126Q9P2H0 1117 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 SH3TC1Q8TE82 1336 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 ZMYM1Q5SVZ6 1142 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 FAM89AQ96GI7 184 aa23.03■■□□□ 1.28
COL13A1-201ENST00000354547 ARFGEF2Q9Y6D5 1785 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 PFKFB2O60825 505 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 HELLSQ9NRZ9 838 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 NRBP1Q9UHY1 535 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 HSPA2P54652 639 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 PI16Q6UXB8 463 aa23.02■■□□□ 1.28
COL13A1-201ENST00000354547 ERCC4Q92889 916 aaPredicted RBP23.02■■□□□ 1.28
COL13A1-201ENST00000354547 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 RNF113AO15541 343 aaKnown RBP23.01■■□□□ 1.27
COL13A1-201ENST00000354547 ZNF165P49910 485 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 TAF7LQ5H9L4 462 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 OSBP2Q969R2 916 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 TNS3Q68CZ2 1445 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 OTUD7BQ6GQQ9 843 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 SYNE4Q8N205 404 aa23.01■■□□□ 1.27
COL13A1-201ENST00000354547 CFAP45Q9UL16 551 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms